Os02g0754100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to S1 self-incompatibility locus-linked pollen G211 protein.
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Os02g0754100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to S1 self-incompatibility locus-linked pollen G211 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.3 | 0.227 | 11 | -0.0765 | 0.37 | 0.811 | 0.999 | -0.0435 | -0.0659 | 7.8 | 29.24 | 97 | -- | -- |
| 23.29 | 0.225 | 11 | -0.0804 | 0.368 | 0.817 | 1.01 | -- | -0.066 | 7.81 | 29.03 | 102 | -- | -- |
| 26.03 | 0.238 | 11 | -0.0633 | 0.373 | 0.772 | -- | -0.1 | -0.0803 | 7.25 | 29.74 | 109 | -- | -- |
| 26.03 | 0.238 | 11 | -0.0703 | 0.369 | 0.782 | -- | -- | -0.0795 | 7.26 | 29.65 | 116 | -- | -- |
| 29.7 | 0.254 | 11 | -0.0485 | -- | 1.06 | -- | 0.315 | -0.0856 | -- | 31.95 | 327 | -- | -- |
| 32.54 | 0.267 | 11 | -0.268 | 0.526 | -- | 0.868 | -- | -0.231 | 6.09 | -- | -- | -- | -- |
| 34.12 | 0.274 | 11 | -0.262 | 0.535 | -- | -- | -- | -0.235 | 5.62 | -- | -- | -- | -- |
| 29.72 | 0.254 | 11 | -0.000476 | -- | 1.09 | -- | -- | -0.0501 | -- | 32.08 | 325 | -- | -- |
| 26.14 | 0.238 | 11 | -- | 0.354 | 0.806 | -- | -- | -0.0755 | 7.36 | 29.75 | 125 | -- | -- |
| 48.99 | 0.327 | 11 | -0.245 | -- | -- | -- | -- | -0.223 | -- | -- | -- | -- | -- |
| 35.93 | 0.28 | 11 | -- | 0.531 | -- | -- | -- | -0.206 | 5.64 | -- | -- | -- | -- |
| 29.72 | 0.254 | 11 | -- | -- | 1.09 | -- | -- | -0.0479 | -- | 32.04 | 325 | -- | -- |
| 50.57 | 0.332 | 11 | -- | -- | -- | -- | -- | -0.195 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.99 | temperature | 30 | 90 | < th | dose dependent | rect. | 12 | 23 |
| 3 | 21.11 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 12 | 21.66 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 18 |
| 14 | 21.67 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 15 | 21.70 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 27 | 21.87 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 29 | 21.93 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 59 | 22.30 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 21 |
| 164 | 23.01 | humidity | 90 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 230 | 23.32 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 242 | 23.37 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 247 | 23.39 | temperature | 20 | 4320 | < th | dose independent | rect. | 14 | 10 |
| 251 | 23.40 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 263 | 23.43 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 277 | 23.48 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 300 | 23.53 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 11 |
| 311 | 23.55 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 316 | 23.56 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 317 | 23.57 | temperature | 20 | 4320 | < th | dose independent | sin | 17 | NA |
| 341 | 23.61 | temperature | 20 | 4320 | > th | dose independent | rect. | 11 | 15 |
| 355 | 23.63 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 15 |
| 378 | 23.66 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 382 | 23.67 | humidity | 50 | 43200 | < th | dose dependent | rect. | 19 | 15 |
| 390 | 23.68 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 397 | 23.69 | temperature | 20 | 4320 | > th | dose independent | sin | 17 | NA |
| 414 | 23.71 | temperature | 25 | 720 | < th | dose dependent | sin | 21 | NA |
| 469 | 23.79 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 470 | 23.79 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 471 | 23.79 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 505 | 23.86 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 506 | 23.86 | humidity | 50 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 546 | 23.91 | radiation | 10 | 4320 | > th | dose dependent | rect. | 17 | 14 |
| 551 | 23.92 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 607 | 23.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 630 | 24.01 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 653 | 24.04 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 693 | 24.08 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 717 | 24.10 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 13 |
| 727 | 24.11 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 741 | 24.13 | temperature | 25 | 90 | < th | dose dependent | sin | 16 | NA |
| 777 | 24.16 | temperature | 25 | 10 | < th | dose dependent | sin | 16 | NA |
| 791 | 24.17 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 805 | 24.19 | wind | 9 | 14400 | < th | dose independent | rect. | 22 | 15 |
| 815 | 24.20 | wind | 9 | 14400 | > th | dose independent | rect. | 22 | 15 |
| 878 | 24.25 | wind | 7 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 934 | 24.29 | radiation | 10 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 944 | 24.30 | humidity | 90 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 951 | 24.30 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 23 |
| 952 | 24.30 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 961 | 24.30 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 963 | 24.31 | temperature | 20 | 4320 | < th | dose independent | no | NA | NA |
| 988 | 24.32 | wind | 7 | 14400 | > th | dose dependent | rect. | 7 | 6 |
| 990 | 24.32 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 11 |