BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0754100 Os02g0754100|AK072432
(1067 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G77680.1 | chr1:29192188-29195963 REVERSE LENGTH=1056 801 0.0
AT2G17510.2 | chr2:7609395-7616242 REVERSE LENGTH=1013 250 2e-66
AT5G02250.1 | chr5:454902-459063 FORWARD LENGTH=804 61 3e-09
>AT1G77680.1 | chr1:29192188-29195963 REVERSE LENGTH=1056
Length = 1055
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/965 (45%), Positives = 603/965 (62%), Gaps = 72/965 (7%)
Query: 118 FFQSHWPEQAVEEAIKGGNAFVGKFRVNAHNRNEAYCTIEGIPVDVLITG-VAQNRAIEG 176
F SHW AV EA++ G AF FRVNAHNRNEAYC I+G+P D+LI G V Q+RA+EG
Sbjct: 147 IFSSHWSLDAVTEALEKGEAFKALFRVNAHNRNEAYCKIDGVPTDILINGNVCQSRAVEG 206
Query: 177 DLVAMTLEPVAYWTRMKGPNITCNPAIGEGSAVREVGETNGNHDGKKGQTDANCRFGNCS 236
D V + L+P++ W +MKG + E +A E + D KK +
Sbjct: 207 DTVVIKLDPLSLWPKMKG-------FVTESAAKPEGTNSPPEKDDKKARQ---------K 250
Query: 237 NGQPVSD---RTHYRHKNSGFSKAVTCENGHATVP--ENCGKDLGEGKSEASRALHRICS 291
NG V + ++K+S K ++ P ++C E K S A+ ++C
Sbjct: 251 NGIDVVEGFEDGFSKNKSSVIGKGAKNGVTPSSPPSLDSCLGSFCEQKGNCS-AVDKLCG 309
Query: 292 MVYSNPSRRPTGKVLAIIKKSPRRDTVVGFLAPFAVC----PDPEQQKNQMSMLSKRMNH 347
++ S P +RPTG+V+A+++KS RD++VG L DP++ K+ +S+
Sbjct: 310 ILSSFPHKRPTGQVVAVVEKSLVRDSIVGLLDVKGWIHYKESDPKRCKSPLSLSDDEY-- 367
Query: 348 RASSYFSGLILLLPTDSKFPHMVVNVSTLPDSVRNHLEEGDA--AKELVAARISDWNEES 405
+ L+P D +FP ++V LP S+R LE D ELVAA+I DW E S
Sbjct: 368 ---------VQLMPADPRFPKLIVPFHVLPGSIRARLENLDPNLEAELVAAQIVDWGEGS 418
Query: 406 LYPCAHVIQLLGKGGQVKTHMDAILFENAISDAEFSPESMECLPDICWKIPQEELEVRKD 465
+P A + L G+G +++ ++AIL++N++ D++FSP S+ LP + W++P+EE++ RKD
Sbjct: 419 PFPVAQITHLFGRGSELEPQINAILYQNSVCDSDFSPGSLTSLPRVPWEVPEEEVQRRKD 478
Query: 466 LRNVLTFTIDPPTATDLDDAISIEMLSGGIVRIGVHIADVSYFVHPETALDAEAQIRSTS 525
LR++ TIDP TATDLDDA+S++ L GG R+GVHIADVSYFV PETALD EA+ RSTS
Sbjct: 479 LRDLCVLTIDPSTATDLDDALSVQSLPGGFFRVGVHIADVSYFVLPETALDTEARFRSTS 538
Query: 526 VYTLRRKISMLPLRLSEDLVSLNPGVDRLTFSIIWDIDPHGNIINRWIGRTVISSCCKLS 585
VY ++RKISMLP LSE++ SL+PG DRL FSI+WD++ G++I+RWIGRT+I SCCKLS
Sbjct: 539 VYLMQRKISMLPPLLSENVGSLSPGADRLAFSILWDLNREGDVIDRWIGRTIIRSCCKLS 598
Query: 586 YDLVQDLICSDGTKFKSASSL-QVHGIFEQDDVIKSLRCLYEISKNLKEIRFKGGALSLE 644
YD QD+I DG + + +HG F+ DV +S++ L EIS L++ RF+ GAL LE
Sbjct: 599 YDHAQDII--DGKSDVAENGWPALHGSFKWCDVTRSVKQLSEISTTLRQKRFRNGALQLE 656
Query: 645 TAKLMIQFDEGGAPCDSFRYERNDACFIVEELMLLANMSAAEVISNAFPNCALLRRHPEP 704
+K + FDE G P D R + F+VEE MLLANM+AAEVIS A+ +LLRRHPEP
Sbjct: 657 NSKPVFLFDEHGVPYDFVTCSRKGSNFLVEEFMLLANMTAAEVISQAYRASSLLRRHPEP 716
Query: 705 NLRKSREFEAFCARNGFEXXXXXXXXXXXXXXRMKEKLKDDPVLFDILMFYASKQMQSAE 764
N RK +EFE FC+++G + ++ LKDD V DIL YA K MQ A
Sbjct: 717 NTRKLKEFEGFCSKHGMDLDISSSGQLQDSLEKITGNLKDDSVFVDILNNYAIKPMQLAS 776
Query: 765 YFCTADLISKRDDWAHYALSVPLYTHFTSPLRRYPDIIVHRTLNAVIEAEKMYLKHRRSL 824
YFCT +L +W HYAL+VPLYTHFTSPLRRYPDI+VHR L A +EAE++Y K +++
Sbjct: 777 YFCTGNLKDSVAEWGHYALAVPLYTHFTSPLRRYPDIVVHRALAAALEAEELYSKQKQTA 836
Query: 825 TGQNGFNTASCEMMHGCFTGLQFSKDAAESKEGSEALSAAAKKFKVPSPDNLGEVAEHCN 884
+ CFTG+ F+KDAAES EG EALS AA K VPS + L +VA +CN
Sbjct: 837 IDEG----------RSCFTGIHFNKDAAESIEGKEALSVAALKHGVPSTEILSDVAAYCN 886
Query: 885 ERKWASRRAEDAGQKLYMWALIKRKEVLVANARVLGLGPKFMSVYVPKLAMERRIHYDEV 944
ERK A+R+ DA KLY W ++K+KE+ ARV+ LG +FM+VY+ KL +ERRI+YD++
Sbjct: 887 ERKLAARKVRDACDKLYTWFVLKQKEIFPCEARVMNLGSRFMTVYISKLGIERRIYYDQI 946
Query: 945 EGLSIEWLEATGTLVLDSCRNRPPQRRGNQVKYRAFEEVAMMVNPXXXXXXXXXXXXGAT 1004
EGL +WLEAT TL++D + +RG + ++ +E +V+P
Sbjct: 947 EGLCADWLEATSTLIVDKLYS----KRGGRGFFKPMKEAVYLVSPCE-----------VC 991
Query: 1005 EAGCDTAKSV--LLSDEAVKA-QVAPAVLPLVIQYLSEIPVVLHAIGGEDSALDIGVRLY 1061
A C +A SV S EAV +VAPAV PL IQ S IPVVLHA+GG+D LDIG RLY
Sbjct: 992 VAKC-SALSVHDTESPEAVSIDEVAPAVFPLTIQLFSTIPVVLHAVGGDDGPLDIGARLY 1050
Query: 1062 MSSYF 1066
MSSY+
Sbjct: 1051 MSSYY 1055
>AT2G17510.2 | chr2:7609395-7616242 REVERSE LENGTH=1013
Length = 1012
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 173/554 (31%), Positives = 266/554 (48%), Gaps = 89/554 (16%)
Query: 300 RPTGKVLAIIKKSPRRDTVVGFLAPFAVCPDPEQQKNQMSMLSKRMNHRASSYFSGLILL 359
RP+G+V+ +I+++ + G L P M+ A S + L
Sbjct: 381 RPSGRVVGVIRRNWH--SYCGSLEP--------------------MSLPAGSGGTAHALF 418
Query: 360 LPTDSKFPHMVVNVSTLPDSVRNHLEEGDAAKELVAARISDWNEESLYPCAHVIQLLGKG 419
+ D + P + +N L +N L+ +V A + W+ +S YP H ++ +GK
Sbjct: 419 VSKDRRIPKIRINTRQL----QNLLD-----MRIVVA-VDSWDRQSRYPSGHYVRPIGKI 468
Query: 420 G------QVKTHMD----------------AILFENAISDAEFSPESMECLPDICWKIPQ 457
G +V+ H++ +L EN + + FS + + CLP + W +
Sbjct: 469 GDKETETEVRDHINLFDSILVGVRWARVGKVVLIENDVDYSPFSSQVLACLPPLPWSVSS 528
Query: 458 EELE--VRKDLRNVLTFTIDPPTATDLDDAISIEMLSGGIVRIGV------------HIA 503
E++ VR+DLR++L F++DPP D+DDA+ L G +GV +IA
Sbjct: 529 EDVSNPVRQDLRHLLVFSVDPPGCKDIDDALHCTSLPNGNFELGVRILESSDSHKYDYIA 588
Query: 504 DVSYFVHPETALDAEAQIRSTSVYTLRRKISMLPLRLSEDLVSLNPGVDRLTFSIIWDID 563
DV+ FVHP T LD EA R TSVY + R+I MLP L+ED+ SL V+RL FS+IW++
Sbjct: 589 DVTNFVHPGTPLDDEASKRGTSVYLVERRIDMLPKPLTEDICSLRADVERLAFSVIWEMS 648
Query: 564 PHGNIINRWIGRTVISSCCKLSYDLVQDLICSDGTKFKSASSLQVHGIFEQDDVIKSLRC 623
P II+ +++I S LSY Q + D ++ D + LR
Sbjct: 649 PDAEIISTRFTKSIIKSSAALSYIEAQARM--DDSRL-------------TDSLTTDLRN 693
Query: 624 LYEISKNLKEIRFKGGALSLETAKLMIQFD-EGGAPCDSFRYERNDACFIVEELMLLANM 682
+ ++K +++ R GAL+L +A++ D E P + Y+ +A +VEE ML AN+
Sbjct: 694 MNTLAKIMRQRRIDRGALTLASAEVKFDIDPENHDPLNIGMYQILEANQMVEEFMLAANV 753
Query: 683 SAAEVISNAFPNCALLRRHPEPNLRKSREFEAFCARNGFEXXXXXXXXXXXXXXRMKEKL 742
S A I FP+C+LLRRHP P A G R +
Sbjct: 754 SVAGQILKLFPSCSLLRRHPTPTREMLEPLLRTAAAIGLTLDVSSSKALADSLDR---AV 810
Query: 743 KDDPVLFDILMFYASKQMQSAEYFCTADLISKRDDWAHYALSVPLYTHFTSPLRRYPDII 802
+DP ++ A++ M A YFC+ DL ++ HY L+ PLYTHFTSP+RRY D+
Sbjct: 811 GEDPYFNKLIRILATRCMTQAVYFCSGDL--SPPEYHHYGLAAPLYTHFTSPIRRYADVF 868
Query: 803 VHRTLNAVIEAEKM 816
VHR L A + K+
Sbjct: 869 VHRLLAASLGIYKL 882
>AT5G02250.1 | chr5:454902-459063 FORWARD LENGTH=804
Length = 803
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 65/125 (52%)
Query: 463 RKDLRNVLTFTIDPPTATDLDDAISIEMLSGGIVRIGVHIADVSYFVHPETALDAEAQIR 522
R DL ++ + ID A +LDDA+S L G ++I +H+AD + +V P + +D EA+ R
Sbjct: 399 RIDLTHLKVYAIDVDEADELDDALSATRLQDGRIKIWIHVADPARYVTPGSKVDREARRR 458
Query: 523 STSVYTLRRKISMLPLRLSEDLVSLNPGVDRLTFSIIWDIDPHGNIINRWIGRTVISSCC 582
TSV+ M P +L+ + +SL G + S+ + G I + ++I
Sbjct: 459 GTSVFLPTATYPMFPEKLAMEGMSLRQGENCNAVSVSVVLRSDGCITEYSVDNSIIRPTY 518
Query: 583 KLSYD 587
L+Y+
Sbjct: 519 MLTYE 523
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.134 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 21,365,420
Number of extensions: 885503
Number of successful extensions: 1914
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1900
Number of HSP's successfully gapped: 3
Length of query: 1067
Length of database: 11,106,569
Length adjustment: 109
Effective length of query: 958
Effective length of database: 8,118,225
Effective search space: 7777259550
Effective search space used: 7777259550
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 117 (49.7 bits)