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Os02g0751300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF581 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.28 (0.0326) R2 : 0.415
β1 : 1.01 (0.12) R2dD : 0.09 R2D : 0.0431
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.77 (0.105) R2dE : 0.353 R2E : 0.321
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.23 (0.0695) R2dN8 : 0.0182 R2N8 : 0.000533
σ : 0.609
deviance : 171.11
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_____
C
peak time of C : --
E
wheather : temperature
threshold : 0.2233
memory length : 239
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 8.7
open length of G : 18.2

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
153.51 0.582 7.29 0.867 0.605 -1.73 0.401 -2.49 0.216 12.4 7.826 114 8.65 19
161.2 0.591 7.27 1.02 0.562 -1.71 0.19 -- 0.249 12 7.784 114 8.73 19
154.11 0.578 7.29 0.881 0.601 -1.72 -- -2.33 0.219 12.4 7.823 119 8.62 19
161.2 0.591 7.26 1.04 0.577 -1.76 -- -- 0.266 12.5 7.959 121 8.63 19
169.99 0.607 7.29 0.876 -- -1.56 -- -1.85 0.195 -- 2.901 178 8.87 18.3
201.21 0.665 7.26 0.774 1.12 -- 1.33 -- 0.195 7.56 -- -- -- --
206.08 0.672 7.26 0.808 1.12 -- -- -- 0.194 7.68 -- -- -- --
171.11 0.609 7.28 1.01 -- -1.77 -- -- 0.23 -- 0.2233 239 8.7 18.2
187.32 0.637 7.31 -- 0.478 -1.53 -- -- 0.0926 11.6 0.6179 104 8.81 19.1
273.38 0.773 7.29 0.822 -- -- -- -- 0.21 -- -- -- -- --
223.27 0.699 7.28 -- 1.12 -- -- -- 0.104 7.63 -- -- -- --
194.22 0.649 7.31 -- -- -1.42 -- -- 0.082 -- -7.134 187 9.45 17.6
291.22 0.797 7.31 -- -- -- -- -- 0.119 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 155.05 temperature 10.0 90 > th dose dependent rect. 9 19
2 155.75 temperature 10.0 10 > th dose dependent rect. 9 20
5 157.37 temperature 10.0 270 > th dose dependent rect. 7 19
23 161.57 temperature 20.0 270 > th dose independent rect. 7 19
24 161.62 radiation 1.0 30 > th dose independent sin 10 NA
29 162.17 radiation 1.0 30 < th dose independent sin 10 NA
36 162.69 radiation 30.0 90 < th dose independent rect. 4 7
41 163.44 radiation 1.0 30 < th dose dependent sin 10 NA
60 165.56 temperature 15.0 270 > th dose dependent rect. 7 6
65 165.78 radiation 1.0 30 > th dose independent rect. 5 4
81 166.08 atmosphere 1015.0 10 < th dose dependent rect. 9 20
84 166.19 atmosphere 1015.0 90 < th dose dependent rect. 9 19
94 166.54 temperature 20.0 270 > th dose independent rect. 18 9
115 167.27 temperature 10.0 270 > th dose dependent rect. 18 9
117 167.36 radiation 30.0 10 < th dose independent rect. 5 14
127 167.64 atmosphere 1000.0 10 > th dose independent rect. 5 14
141 167.99 radiation 40.0 10 < th dose dependent rect. 5 14
144 168.08 radiation 1.0 30 < th dose independent rect. 19 19
146 168.13 temperature 10.0 270 > th dose dependent rect. 22 15
169 168.31 radiation 30.0 90 < th dose independent rect. 4 14
170 168.36 temperature 30.0 90 < th dose independent rect. 4 7
172 168.37 radiation 1.0 30 < th dose independent rect. 19 17
177 168.44 temperature 15.0 10 > th dose dependent rect. 9 7
178 168.47 radiation 1.0 30 < th dose independent rect. 19 13
198 168.85 humidity 70.0 10 > th dose independent rect. 5 5
211 169.13 atmosphere 1000.0 10 > th dose independent rect. 5 16
214 169.17 temperature 30.0 90 < th dose independent rect. 4 14
218 169.25 radiation 40.0 270 < th dose dependent rect. 3 14
230 169.47 atmosphere 1000.0 90 > th dose independent rect. 4 19
231 169.47 radiation 40.0 90 < th dose dependent rect. 4 7
232 169.48 radiation 1.0 30 < th dose dependent rect. 19 21
235 169.58 temperature 20.0 90 > th dose independent rect. 21 7
244 169.68 radiation 1.0 30 < th dose dependent rect. 19 19
259 169.72 temperature 15.0 270 > th dose dependent rect. 18 19
262 169.73 precipitation 0.1 270 < th dose independent rect. 3 14
263 169.73 precipitation 0.1 270 < th dose dependent rect. 3 14
274 169.85 radiation 40.0 10 < th dose dependent rect. 5 6
278 169.88 humidity 70.0 90 > th dose independent rect. 4 5
282 169.96 radiation 1.0 30 < th dose dependent rect. 19 17
286 169.98 temperature 10.0 270 > th dose dependent rect. 17 21
291 170.00 precipitation 0.1 270 < th dose independent rect. 3 4
292 170.00 precipitation 0.1 270 < th dose dependent rect. 3 4
293 170.02 radiation 30.0 10 < th dose independent rect. 5 16
296 170.04 atmosphere 995.0 10 > th dose dependent rect. 5 14
305 170.07 radiation 1.0 30 < th dose dependent rect. 19 13
362 170.59 temperature 30.0 10 < th dose independent rect. 5 14
366 170.61 temperature 30.0 90 < th dose independent rect. 4 5
367 170.61 radiation 20.0 10 < th dose independent rect. 5 19
378 170.75 temperature 10.0 10 > th dose dependent rect. 5 4
383 170.78 temperature 10.0 10 > th dose dependent rect. 21 8
385 170.82 radiation 1.0 30 < th dose independent rect. 19 11
396 170.91 wind 9.0 90 < th dose independent rect. 9 19
404 170.99 wind 9.0 90 < th dose dependent rect. 4 5
416 171.13 radiation 20.0 270 < th dose independent rect. 2 7
421 171.19 wind 7.0 10 < th dose dependent rect. 5 4
426 171.22 temperature 10.0 90 > th dose dependent rect. 21 7
427 171.23 wind 9.0 270 < th dose independent rect. 6 22
448 171.38 temperature 20.0 270 > th dose independent rect. 21 5
454 171.40 wind 3.0 10 < th dose independent rect. 5 4
457 171.41 wind 5.0 270 < th dose independent rect. 3 4
461 171.44 radiation 1.0 270 > th dose independent rect. 5 1
466 171.45 radiation 1.0 90 < th dose dependent rect. 5 23
473 171.48 radiation 40.0 10 < th dose dependent rect. 5 19
482 171.54 temperature 10.0 270 > th dose dependent rect. 4 2
490 171.61 radiation 1.0 30 < th dose dependent rect. 19 11
495 171.62 wind 9.0 270 < th dose independent rect. 7 20
496 171.63 radiation 30.0 90 < th dose independent rect. 4 19
506 171.69 temperature 10.0 90 > th dose independent rect. 4 5
508 171.69 humidity 50.0 90 > th dose independent rect. 4 5
509 171.69 atmosphere 995.0 90 > th dose independent rect. 4 5
510 171.69 atmosphere 1015.0 90 < th dose independent rect. 4 5
511 171.69 temperature 10.0 90 > th dose independent rect. 9 19
512 171.70 wind 5.0 270 < th dose independent rect. 4 2
514 171.70 atmosphere 1000.0 270 > th dose independent rect. 13 9
523 171.74 radiation 30.0 90 < th dose independent rect. 4 17
526 171.77 atmosphere 1015.0 90 < th dose independent rect. 9 19
532 171.79 radiation 30.0 90 < th dose independent rect. 13 22
544 171.80 radiation 1.0 30 < th dose independent rect. 21 17
547 171.81 temperature 30.0 10 < th dose independent rect. 5 5
588 171.93 wind 9.0 10 < th dose independent rect. 9 20
591 171.96 radiation 30.0 90 < th dose independent rect. 15 20
593 171.97 radiation 40.0 10 < th dose dependent rect. 5 16
599 172.04 radiation 1.0 30 < th dose independent rect. 21 15
607 172.06 wind 9.0 270 < th dose dependent rect. 4 2
613 172.10 precipitation 0.1 10 < th dose independent rect. 5 4
614 172.10 precipitation 0.1 10 < th dose dependent rect. 5 4
616 172.12 atmosphere 1015.0 90 < th dose dependent rect. 9 6
625 172.15 radiation 1.0 30 < th dose independent rect. 21 11
636 172.21 atmosphere 995.0 10 > th dose dependent rect. 5 16
638 172.23 radiation 10.0 270 < th dose independent rect. 4 2
650 172.30 precipitation 0.1 270 < th dose independent rect. 2 6
652 172.30 precipitation 0.1 270 < th dose dependent rect. 2 6
658 172.35 humidity 50.0 10 > th dose dependent rect. 19 10
664 172.37 radiation 40.0 270 < th dose dependent rect. 3 4
665 172.38 atmosphere 1015.0 10 < th dose independent rect. 9 20
667 172.39 wind 9.0 90 < th dose dependent rect. 4 7
693 172.49 temperature 10.0 270 > th dose independent rect. 7 20
706 172.53 temperature 10.0 10 > th dose independent rect. 5 4
709 172.53 humidity 50.0 10 > th dose independent rect. 5 4
711 172.53 atmosphere 995.0 10 > th dose independent rect. 5 4
712 172.53 atmosphere 1015.0 10 < th dose independent rect. 5 4
713 172.53 temperature 10.0 10 > th dose independent rect. 9 20
720 172.56 temperature 10.0 270 > th dose independent rect. 4 2
722 172.56 temperature 30.0 270 < th dose independent rect. 4 2
723 172.56 humidity 50.0 270 > th dose independent rect. 4 2
726 172.56 atmosphere 995.0 270 > th dose independent rect. 4 2
727 172.56 atmosphere 1015.0 270 < th dose independent rect. 4 2
732 172.56 temperature 10.0 270 > th dose independent rect. 6 22
740 172.59 humidity 50.0 90 > th dose dependent rect. 4 7
745 172.65 humidity 50.0 90 > th dose dependent rect. 19 9
791 172.83 temperature 20.0 10 > th dose independent rect. 21 8
799 172.87 radiation 40.0 270 < th dose dependent rect. 4 2
881 173.20 radiation 30.0 90 < th dose independent rect. 15 18
895 173.28 temperature 20.0 270 > th dose independent rect. 23 2
906 173.36 wind 9.0 270 < th dose independent rect. 17 10
915 173.40 temperature 20.0 90 > th dose independent rect. 23 5
945 173.53 precipitation 0.1 10 < th dose independent rect. 5 14
947 173.53 precipitation 0.1 10 < th dose dependent rect. 5 14
957 173.56 radiation 1.0 30 < th dose dependent rect. 21 17
961 173.59 temperature 10.0 270 > th dose independent rect. 17 10
962 173.59 radiation 20.0 270 < th dose independent rect. 17 10
965 173.59 temperature 10.0 270 > th dose independent rect. 3 14
966 173.59 atmosphere 1015.0 270 < th dose independent rect. 3 14
976 173.62 humidity 50.0 270 > th dose independent rect. 18 9
988 173.64 atmosphere 1000.0 90 > th dose independent rect. 4 21
990 173.64 radiation 1.0 90 < th dose dependent rect. 19 9
994 173.65 temperature 30.0 90 < th dose independent rect. 19 9
997 173.65 atmosphere 995.0 90 > th dose independent rect. 19 9