Os02g0750400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein prenyltransferase domain containing protein.
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Os02g0750400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein prenyltransferase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 123.36 | 0.522 | 11.1 | 0.213 | 2.27 | -0.823 | -0.534 | -1.77 | -0.625 | 19.2 | 39.5 | 71 | -- | -- |
| 128.54 | 0.528 | 11 | 0.214 | 2.25 | -0.743 | -0.759 | -- | -0.62 | 19.1 | 40 | 64 | -- | -- |
| 124.11 | 0.519 | 11.1 | 0.213 | 2.27 | -0.823 | -- | -1.84 | -0.622 | 19.2 | 39.5 | 70 | -- | -- |
| 130.02 | 0.531 | 11 | 0.229 | 2.26 | -0.764 | -- | -- | -0.623 | 19.1 | 40 | 59 | -- | -- |
| 276.64 | 0.775 | 11.1 | 0.103 | -- | -1.59 | -- | 0.404 | -0.933 | -- | 37.26 | 798 | -- | -- |
| 137.88 | 0.55 | 11 | 0.206 | 2.24 | -- | -0.784 | -- | -0.588 | 18.8 | -- | -- | -- | -- |
| 139.46 | 0.553 | 11 | 0.219 | 2.24 | -- | -- | -- | -0.591 | 18.8 | -- | -- | -- | -- |
| 162.87 | 0.594 | 10.9 | 0.119 | -- | -3.11 | -- | -- | -0.689 | -- | 1.38 | 823 | -- | -- |
| 131.32 | 0.534 | 11 | -- | 2.26 | -0.753 | -- | -- | -0.635 | 19.1 | 40.01 | 59 | -- | -- |
| 401.63 | 0.936 | 11 | 0.169 | -- | -- | -- | -- | -0.634 | -- | -- | -- | -- | -- |
| 140.72 | 0.555 | 11 | -- | 2.24 | -- | -- | -- | -0.615 | 18.8 | -- | -- | -- | -- |
| 157.17 | 0.584 | 11 | -- | -- | -2.91 | -- | -- | -0.667 | -- | 1.45 | 834 | -- | -- |
| 402.38 | 0.936 | 11 | -- | -- | -- | -- | -- | -0.653 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 109.46 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 3 | 110.27 | radiation | 1.0 | 30 | > th | dose independent | rect. | 18 | 14 |
| 4 | 110.35 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 20 |
| 5 | 110.46 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 8 | 110.63 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 9 | 110.63 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 10 | 110.65 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 11 | 110.65 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 13 | 110.66 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 15 | 110.66 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 16 | 110.66 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 19 | 110.66 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 20 | 110.66 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 21 | 110.66 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 24 | 110.66 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 37 | 110.81 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 38 | 110.85 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 44 | 111.14 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 56 | 111.34 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 20 |
| 57 | 111.34 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 20 |
| 71 | 111.49 | wind | 9.0 | 90 | < th | dose dependent | rect. | 8 | 20 |
| 73 | 111.59 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 74 | 111.64 | wind | 9.0 | 30 | < th | dose dependent | rect. | 5 | 3 |
| 80 | 111.75 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 87 | 112.04 | temperature | 15.0 | 90 | > th | dose independent | rect. | 17 | 15 |
| 106 | 112.44 | wind | 9.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 107 | 112.44 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 110 | 112.44 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 112 | 112.44 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 113 | 112.44 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 114 | 112.44 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 20 |
| 139 | 112.74 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 146 | 112.83 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 156 | 113.05 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 209 | 113.32 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 250 | 113.51 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 281 | 113.72 | wind | 5.0 | 90 | < th | dose independent | rect. | 21 | 7 |
| 282 | 113.73 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 301 | 113.98 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 22 | 6 |
| 341 | 114.28 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 343 | 114.29 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 351 | 114.37 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 17 |
| 353 | 114.38 | temperature | 15.0 | 10 | > th | dose independent | rect. | 17 | 15 |
| 378 | 114.45 | wind | 1.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 392 | 114.52 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 18 |
| 404 | 114.60 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 420 | 114.69 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 433 | 114.74 | wind | 9.0 | 90 | < th | dose dependent | rect. | 21 | 7 |
| 435 | 114.76 | humidity | 50.0 | 10 | > th | dose independent | rect. | 8 | 21 |
| 474 | 115.03 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 23 | 6 |
| 492 | 115.15 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 516 | 115.34 | wind | 1.0 | 90 | > th | dose independent | rect. | 8 | 9 |
| 519 | 115.37 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 520 | 115.37 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 522 | 115.37 | radiation | 40.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 531 | 115.45 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 22 | 6 |
| 535 | 115.45 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 22 | 6 |
| 548 | 115.57 | temperature | 10.0 | 90 | > th | dose independent | rect. | 22 | 6 |
| 549 | 115.57 | temperature | 30.0 | 90 | < th | dose independent | rect. | 22 | 6 |
| 550 | 115.57 | humidity | 50.0 | 90 | > th | dose independent | rect. | 22 | 6 |
| 553 | 115.57 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 22 | 6 |
| 554 | 115.57 | radiation | 1.0 | 90 | < th | dose independent | rect. | 22 | 6 |
| 559 | 115.57 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 18 |
| 560 | 115.57 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 18 |
| 562 | 115.57 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 22 | 6 |
| 581 | 115.62 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 10 |
| 583 | 115.62 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 612 | 115.71 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 10 |
| 631 | 115.76 | wind | 9.0 | 90 | < th | dose independent | rect. | 17 | 15 |
| 652 | 115.80 | temperature | 15.0 | 270 | > th | dose independent | rect. | 2 | 19 |
| 669 | 115.88 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 18 |
| 670 | 115.88 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 18 |
| 698 | 115.93 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 9 |
| 705 | 115.94 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 21 |
| 707 | 115.94 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 10 |
| 743 | 116.02 | radiation | 1.0 | 30 | < th | dose dependent | sin | 10 | NA |
| 764 | 116.07 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 20 |
| 780 | 116.10 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 22 | 6 |
| 791 | 116.14 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 10 |
| 800 | 116.17 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 22 | 3 |
| 806 | 116.21 | radiation | 30.0 | 90 | < th | dose independent | rect. | 4 | 7 |
| 822 | 116.28 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 17 | 15 |
| 831 | 116.33 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 17 | 14 |
| 833 | 116.34 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 17 | 15 |
| 835 | 116.34 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 17 | 15 |
| 841 | 116.36 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 870 | 116.43 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 18 | 13 |
| 877 | 116.46 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 893 | 116.50 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 22 | 3 |
| 896 | 116.51 | wind | 9.0 | 90 | < th | dose independent | rect. | 4 | 18 |
| 899 | 116.53 | humidity | 50.0 | 90 | > th | dose independent | rect. | 17 | 15 |
| 954 | 116.62 | radiation | 1.0 | 30 | < th | dose independent | sin | 10 | NA |
| 977 | 116.70 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 11 |
| 978 | 116.70 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 17 |
| 986 | 116.72 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 3 |