Os02g0750100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to H(+)-transporting ATP synthase (EC 3.6.1.34) (Fragment).
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Os02g0750100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to H(+)-transporting ATP synthase (EC 3.6.1.34) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75.63 | 0.409 | 15.5 | -0.843 | 0.796 | -1.16 | 0.68 | 3.23 | -0.458 | 22.6 | 26.39 | 12 | -- | -- |
| 78.39 | 0.416 | 15.5 | -1.14 | 0.815 | -0.891 | 0.49 | -- | -0.525 | 22.6 | 26.39 | 12 | -- | -- |
| 77.18 | 0.412 | 15.5 | -0.912 | 0.789 | -1.18 | -- | 2.82 | -0.471 | 22.4 | 26.42 | 9 | -- | -- |
| 79.21 | 0.415 | 15.5 | -1.15 | 0.801 | -0.923 | -- | -- | -0.51 | 22.3 | 25.92 | 9 | -- | -- |
| 111.6 | 0.495 | 15.4 | -0.779 | -- | -1.53 | -- | 3.27 | -0.415 | -- | 25.79 | 5 | -- | -- |
| 89.76 | 0.444 | 15.5 | -1.25 | 0.971 | -- | 0.668 | -- | -0.55 | 23.6 | -- | -- | -- | -- |
| 91.67 | 0.448 | 15.5 | -1.28 | 0.969 | -- | -- | -- | -0.552 | 23.5 | -- | -- | -- | -- |
| 111.25 | 0.491 | 15.4 | -0.989 | -- | -1.37 | -- | -- | -0.317 | -- | 18.9 | 2 | -- | -- |
| 109.44 | 0.487 | 15.4 | -- | 0.722 | -1.23 | -- | -- | -0.228 | 21.6 | 21.3 | 13 | -- | -- |
| 150.65 | 0.574 | 15.5 | -1.25 | -- | -- | -- | -- | -0.541 | -- | -- | -- | -- | -- |
| 134.87 | 0.543 | 15.5 | -- | 0.955 | -- | -- | -- | -0.409 | 23.5 | -- | -- | -- | -- |
| 134.4 | 0.54 | 15.4 | -- | -- | -1.94 | -- | -- | -0.181 | -- | 14.32 | 2 | -- | -- |
| 192.11 | 0.647 | 15.5 | -- | -- | -- | -- | -- | -0.402 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.75 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 2 | 71.01 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 1 |
| 4 | 71.41 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 6 |
| 21 | 73.12 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 4 |
| 24 | 73.31 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 6 |
| 28 | 73.45 | temperature | 20 | 270 | > th | dose dependent | sin | 5 | NA |
| 32 | 73.63 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 39 | 73.76 | temperature | 10 | 270 | > th | dose dependent | sin | 3 | NA |
| 48 | 73.90 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 8 |
| 52 | 73.96 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 13 |
| 58 | 74.07 | temperature | 10 | 720 | > th | dose dependent | sin | 7 | NA |
| 66 | 74.21 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 78 | 74.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 112 | 74.94 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 10 |
| 134 | 75.14 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 12 |
| 146 | 75.21 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 14 |
| 162 | 75.35 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 164 | 75.37 | temperature | 20 | 720 | > th | dose independent | sin | 9 | NA |
| 176 | 75.47 | temperature | 30 | 720 | < th | dose dependent | sin | 6 | NA |
| 178 | 75.50 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 4 |
| 191 | 75.55 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 249 | 75.77 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 16 |
| 251 | 75.77 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 12 |
| 255 | 75.78 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 12 |
| 324 | 75.97 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 2 |
| 327 | 75.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 2 |
| 334 | 76.02 | temperature | 30 | 270 | < th | dose dependent | sin | 2 | NA |
| 349 | 76.06 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 360 | 76.09 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 6 |
| 361 | 76.09 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 18 |
| 392 | 76.17 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 10 |
| 408 | 76.21 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 433 | 76.26 | temperature | 25 | 270 | < th | dose independent | rect. | 5 | 8 |
| 449 | 76.30 | temperature | 25 | 90 | > th | dose dependent | rect. | 9 | 12 |
| 470 | 76.35 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 12 |
| 495 | 76.39 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 13 |
| 502 | 76.40 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 11 |
| 535 | 76.47 | temperature | 25 | 10 | > th | dose dependent | sin | 23 | NA |
| 641 | 76.68 | temperature | 20 | 720 | < th | dose independent | sin | 7 | NA |
| 722 | 76.81 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 737 | 76.83 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 738 | 76.84 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 4 |
| 744 | 76.84 | temperature | 25 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 752 | 76.86 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 773 | 76.88 | temperature | 25 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 791 | 76.92 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 4 |
| 809 | 76.94 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 14 |
| 822 | 76.97 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 1 |