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Os02g0744900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Geranylgeranyl reductase (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 15.6 (0.0239) R2 : 0.785
β1 : -0.943 (0.0874) R2dD : 0.0569 R2D : 0.0241
β2 : 2.19 (0.058) R2dC : 0.672 R2C : 0.645
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.672 (0.0509) R2dN8 : 0.11 R2N8 : 0.0539
σ : 0.449
deviance : 91.86
__
_____
C
peak time of C : 9.85
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
81.72 0.425 15.7 -1.49 2.18 1.82 -0.0349 -6.89 -0.633 9.83 999.8 31 -- --
82.32 0.426 15.6 -1.05 2.18 0.59 -0.0509 -- -0.633 9.82 999.9 149 -- --
81.73 0.421 15.7 -1.5 2.18 1.82 -- -6.89 -0.633 9.83 999.8 32 -- --
82.32 0.423 15.6 -1.05 2.18 0.612 -- -- -0.633 9.83 999.6 40 -- --
364.51 0.894 15.7 -0.972 -- 0.38 -- 1.78 -0.626 -- 999.8 32 -- --
91.86 0.449 15.6 -0.942 2.19 -- -0.027 -- -0.672 9.85 -- -- -- --
91.86 0.449 15.6 -0.943 2.19 -- -- -- -0.672 9.85 -- -- -- --
364.55 0.893 15.7 -1.09 -- 0.696 -- -- -0.626 -- 999.6 15 -- --
110.24 0.489 15.6 -- 2.19 0.456 -- -- -0.533 9.88 999.5 41 -- --
377.47 0.908 15.7 -0.966 -- -- -- -- -0.671 -- -- -- -- --
115.3 0.502 15.6 -- 2.19 -- -- -- -0.567 9.88 -- -- -- --
367.88 0.893 15.6 -- -- -0.772 -- -- -0.704 -- 1009 493 -- --
402.09 0.936 15.7 -- -- -- -- -- -0.564 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 66.35 atmosphere 995.0 270 > th dose dependent rect. 15 6
2 66.85 atmosphere 1000.0 10 > th dose independent rect. 16 20
3 66.89 temperature 10.0 270 > th dose dependent rect. 21 18
4 66.90 atmosphere 1000.0 270 > th dose independent rect. 15 19
5 67.24 atmosphere 1000.0 270 > th dose independent rect. 16 17
9 67.52 atmosphere 1000.0 270 > th dose independent rect. 15 6
13 68.23 atmosphere 995.0 270 > th dose dependent rect. 16 4
16 68.64 atmosphere 995.0 10 > th dose dependent rect. 16 7
38 69.79 temperature 20.0 270 > th dose independent rect. 15 6
48 70.13 temperature 20.0 270 > th dose independent rect. 16 4
50 70.14 temperature 10.0 270 > th dose dependent rect. 9 6
64 70.70 atmosphere 995.0 270 > th dose independent rect. 5 15
66 70.76 radiation 30.0 270 < th dose independent rect. 15 6
69 70.87 temperature 10.0 270 > th dose dependent rect. 8 8
78 71.07 temperature 15.0 270 > th dose independent rect. 16 17
79 71.08 wind 7.0 270 < th dose independent rect. 20 9
86 71.19 wind 7.0 270 < th dose independent rect. 21 18
93 71.28 precipitation 0.1 270 < th dose independent rect. 21 18
94 71.28 precipitation 0.1 270 < th dose dependent rect. 21 18
95 71.31 temperature 15.0 270 > th dose independent rect. 15 19
110 71.63 temperature 10.0 270 > th dose independent rect. 21 18
115 71.70 wind 1.0 270 > th dose independent rect. 15 6
116 71.70 humidity 50.0 270 > th dose independent rect. 21 18
120 71.82 wind 9.0 270 < th dose independent rect. 15 6
130 72.04 humidity 50.0 270 > th dose independent rect. 10 5
133 72.09 radiation 1.0 270 < th dose dependent rect. 20 9
135 72.10 precipitation 0.1 270 < th dose independent rect. 20 9
136 72.10 precipitation 0.1 270 < th dose dependent rect. 20 9
140 72.15 temperature 15.0 270 > th dose independent rect. 10 5
145 72.20 atmosphere 1015.0 270 < th dose independent rect. 15 6
146 72.22 wind 9.0 270 < th dose independent rect. 10 5
148 72.22 wind 9.0 270 < th dose independent rect. 9 7
155 72.27 temperature 10.0 270 > th dose independent rect. 20 9
156 72.27 temperature 30.0 270 < th dose independent rect. 20 9
157 72.27 humidity 50.0 270 > th dose independent rect. 20 9
160 72.27 atmosphere 995.0 270 > th dose independent rect. 20 9
161 72.27 radiation 1.0 270 < th dose independent rect. 20 9
166 72.27 temperature 10.0 270 > th dose independent rect. 5 15
167 72.27 atmosphere 1015.0 270 < th dose independent rect. 5 15
172 72.34 precipitation 0.1 270 < th dose independent rect. 10 5
174 72.34 precipitation 0.1 270 < th dose dependent rect. 10 5
176 72.35 humidity 90.0 270 < th dose independent rect. 10 5
177 72.35 precipitation 0.1 270 < th dose independent rect. 9 7
179 72.35 precipitation 0.1 270 < th dose dependent rect. 9 7
181 72.36 atmosphere 1015.0 270 < th dose independent rect. 10 5
186 72.38 temperature 15.0 270 > th dose independent rect. 9 7
189 72.40 atmosphere 1015.0 270 < th dose independent rect. 9 7
191 72.41 radiation 20.0 270 < th dose independent rect. 16 4
193 72.41 atmosphere 1000.0 10 > th dose independent rect. 18 16
202 72.53 wind 1.0 270 > th dose independent rect. 10 5
204 72.55 atmosphere 995.0 270 > th dose independent rect. 21 18
205 72.55 wind 7.0 270 < th dose independent rect. 20 20
207 72.56 wind 1.0 270 > th dose independent rect. 9 7
213 72.60 radiation 1.0 270 > th dose independent rect. 10 5
216 72.63 radiation 40.0 90 < th dose dependent rect. 16 7
226 72.72 wind 9.0 270 < th dose independent rect. 16 17
229 72.74 temperature 30.0 270 < th dose independent rect. 16 3
232 72.76 precipitation 0.1 270 < th dose independent rect. 20 20
233 72.76 precipitation 0.1 270 < th dose dependent rect. 20 20
234 72.77 wind 9.0 270 < th dose independent rect. 15 19
239 72.79 humidity 50.0 270 > th dose independent rect. 16 3
242 72.79 radiation 30.0 270 < th dose dependent rect. 16 3
252 72.90 humidity 50.0 270 > th dose independent rect. 15 6
261 72.95 radiation 20.0 10 < th dose dependent rect. 16 7
271 73.00 atmosphere 1015.0 270 < th dose independent rect. 16 4
273 73.00 temperature 10.0 270 > th dose independent rect. 20 20
280 73.06 wind 9.0 270 < th dose independent rect. 5 15
284 73.08 wind 9.0 270 < th dose independent rect. 16 4
290 73.12 radiation 1.0 270 > th dose independent rect. 9 7
292 73.12 atmosphere 1015.0 270 < th dose independent rect. 21 18
295 73.14 atmosphere 995.0 270 > th dose independent rect. 10 5
297 73.14 temperature 15.0 10 > th dose independent rect. 16 20
306 73.18 radiation 10.0 270 < th dose dependent rect. 17 2
310 73.24 humidity 50.0 270 > th dose independent rect. 16 17
313 73.25 radiation 40.0 270 < th dose independent rect. 15 19
318 73.28 humidity 70.0 270 > th dose independent rect. 17 2
332 73.38 precipitation 0.1 270 < th dose independent rect. 15 6
333 73.38 precipitation 0.1 270 < th dose dependent rect. 15 6
351 73.48 atmosphere 1015.0 90 < th dose dependent rect. 21 8
362 73.57 temperature 30.0 30 < th dose independent rect. 16 7
371 73.59 temperature 10.0 90 > th dose independent rect. 23 17
376 73.62 humidity 50.0 270 > th dose independent rect. 15 19
387 73.68 radiation 40.0 270 < th dose independent rect. 16 17
407 73.81 atmosphere 995.0 10 > th dose dependent rect. 16 20
435 73.95 radiation 10.0 10 < th dose independent rect. 16 7
442 73.97 humidity 90.0 270 < th dose independent rect. 9 7
463 73.99 temperature 10.0 10 > th dose dependent rect. 12 4
487 74.05 humidity 50.0 270 > th dose independent rect. 11 3
495 74.08 atmosphere 1015.0 90 < th dose independent rect. 23 17
498 74.09 atmosphere 1010.0 30 < th dose independent rect. 16 7
502 74.09 humidity 50.0 10 > th dose independent rect. 23 17
506 74.10 atmosphere 1010.0 270 < th dose independent rect. 11 3
540 74.16 atmosphere 995.0 90 > th dose dependent rect. 16 19
541 74.17 temperature 10.0 270 > th dose dependent rect. 16 5
543 74.19 humidity 50.0 10 > th dose dependent rect. 16 7
576 74.30 humidity 90.0 270 < th dose independent rect. 11 3
586 74.33 radiation 40.0 270 < th dose dependent rect. 16 17
594 74.38 temperature 15.0 270 > th dose independent rect. 11 3
600 74.40 wind 9.0 270 < th dose independent rect. 11 3
607 74.42 temperature 10.0 1440 > th dose independent rect. 17 7
610 74.42 radiation 30.0 1440 < th dose independent rect. 17 7
616 74.42 temperature 10.0 1440 > th dose independent rect. 24 17
633 74.48 radiation 20.0 270 < th dose independent rect. 16 17
639 74.51 precipitation 0.1 10 < th dose independent rect. 16 7
641 74.51 precipitation 0.1 10 < th dose dependent rect. 16 7
647 74.53 atmosphere 995.0 270 > th dose independent rect. 11 3
651 74.53 precipitation 0.1 270 < th dose independent rect. 15 19
654 74.53 precipitation 0.1 270 < th dose dependent rect. 15 19
666 74.57 temperature 10.0 270 > th dose dependent rect. 20 8
669 74.59 wind 1.0 270 > th dose independent rect. 11 3
672 74.60 precipitation 0.1 270 < th dose independent rect. 16 4
674 74.60 precipitation 0.1 270 < th dose dependent rect. 16 4
680 74.62 temperature 20.0 270 > th dose independent rect. 20 8
684 74.63 humidity 50.0 90 > th dose dependent rect. 16 5
688 74.64 radiation 40.0 270 < th dose independent rect. 4 16
690 74.66 wind 1.0 10 > th dose independent rect. 12 4
703 74.68 precipitation 0.1 270 < th dose independent rect. 16 17
707 74.68 precipitation 0.1 270 < th dose dependent rect. 16 17
711 74.70 temperature 30.0 270 < th dose independent rect. 16 17
731 74.78 precipitation 0.1 270 < th dose independent rect. 5 15
732 74.78 precipitation 0.1 270 < th dose dependent rect. 5 15
743 74.81 wind 9.0 10 < th dose independent rect. 12 4
757 74.86 atmosphere 995.0 90 > th dose dependent rect. 5 17
766 74.88 atmosphere 1015.0 30 < th dose dependent rect. 23 17
768 74.90 radiation 40.0 270 < th dose dependent rect. 5 15
769 74.91 atmosphere 1010.0 10 < th dose independent rect. 12 4
774 74.92 temperature 10.0 10 > th dose independent rect. 12 4
777 74.92 precipitation 0.1 10 < th dose independent rect. 12 4
780 74.92 precipitation 0.1 10 < th dose dependent rect. 12 4
781 74.92 atmosphere 1015.0 90 < th dose dependent rect. 11 18
801 74.99 temperature 10.0 90 > th dose dependent rect. 22 7
809 75.01 precipitation 0.1 270 < th dose independent rect. 11 15
811 75.01 precipitation 0.1 270 < th dose dependent rect. 11 15
833 75.09 humidity 50.0 10 > th dose independent rect. 12 4
852 75.12 wind 9.0 10 < th dose independent rect. 16 20
861 75.15 humidity 50.0 90 > th dose dependent rect. 21 8
865 75.16 humidity 90.0 10 < th dose independent rect. 12 4
870 75.17 atmosphere 995.0 270 > th dose independent rect. 20 20
900 75.25 wind 9.0 270 < th dose dependent rect. 10 5
910 75.27 radiation 1.0 30 < th dose dependent rect. 5 18
913 75.28 radiation 1.0 30 < th dose independent rect. 5 18
939 75.32 radiation 1.0 10 > th dose independent rect. 12 4
954 75.37 atmosphere 1000.0 10 > th dose independent rect. 16 10
976 75.43 radiation 1.0 30 < th dose independent rect. 11 12
998 75.47 atmosphere 1015.0 90 < th dose dependent rect. 22 19