Os02g0744800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0744800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 193.41 | 0.653 | 4.81 | 1.27 | 1.56 | -2.39 | 0.16 | 2.27 | -0.0764 | 9.81 | 13.78 | 573 | -- | -- |
| 196.87 | 0.653 | 4.86 | 0.887 | 1.58 | -2.28 | -0.147 | -- | -0.19 | 9.77 | 14.67 | 573 | -- | -- |
| 193.5 | 0.648 | 4.82 | 1.25 | 1.56 | -2.39 | -- | 2.14 | -0.0807 | 9.83 | 13.74 | 570 | -- | -- |
| 196.88 | 0.654 | 4.86 | 0.878 | 1.56 | -2.36 | -- | -- | -0.177 | 9.88 | 14.2 | 559 | -- | -- |
| 308.42 | 0.818 | 4.79 | 1.79 | -- | -3.36 | -- | 2.75 | 0.194 | -- | 16.12 | 692 | -- | -- |
| 261.86 | 0.759 | 4.92 | 0.326 | 2.08 | -- | 0.114 | -- | -0.533 | 9.13 | -- | -- | -- | -- |
| 261.91 | 0.758 | 4.92 | 0.331 | 2.07 | -- | -- | -- | -0.533 | 9.13 | -- | -- | -- | -- |
| 311.48 | 0.822 | 4.86 | 1.21 | -- | -3.54 | -- | -- | 0.0152 | -- | 14.8 | 688 | -- | -- |
| 214.94 | 0.683 | 4.89 | -- | 1.69 | -1.98 | -- | -- | -0.326 | 9.86 | 12.79 | 484 | -- | -- |
| 510.68 | 1.06 | 4.98 | 0.325 | -- | -- | -- | -- | -0.522 | -- | -- | -- | -- | -- |
| 264.79 | 0.761 | 4.93 | -- | 2.08 | -- | -- | -- | -0.57 | 9.12 | -- | -- | -- | -- |
| 345.92 | 0.866 | 4.9 | -- | -- | -2.95 | -- | -- | -0.164 | -- | 15.9 | 677 | -- | -- |
| 513.46 | 1.06 | 4.99 | -- | -- | -- | -- | -- | -0.558 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 188.07 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 17 |
| 3 | 188.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 18 |
| 14 | 189.61 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 29 | 190.33 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 19 |
| 68 | 191.55 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 69 | 191.61 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 81 | 191.92 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 7 |
| 82 | 191.97 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 92 | 192.09 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 7 |
| 145 | 192.61 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 154 | 192.65 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 12 |
| 191 | 192.76 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 12 |
| 259 | 192.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 267 | 193.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 466 | 193.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 486 | 193.76 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 546 | 193.92 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 642 | 194.19 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 756 | 194.46 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 878 | 194.84 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 947 | 195.00 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |