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Os02g0743800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : CS domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.92 (0.0218) R2 : 0.756
β1 : 2.42 (0.08) R2dD : 0.508 R2D : 0.248
β2 : 0.723 (0.0537) R2dC : 0.0974 R2C : -0.0159
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.13 (0.0466) R2dN8 : 0.418 R2N8 : 0.161
σ : 0.411
deviance : 76.94
__
_____
C
peak time of C : 14.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
59.9 0.364 7.12 0.877 0.676 0.438 0.655 -7.69 0.863 14.5 27.5 4570 -- --
64.27 0.373 6.87 2.76 0.66 -0.63 0.363 -- 1.44 14.6 33.02 15552 -- --
61.29 0.365 7.12 0.872 0.68 0.494 -- -8.07 0.883 14.6 27.86 4520 -- --
63.31 0.371 6.85 2.82 0.687 -0.746 -- -- 1.42 14.6 32.7 21291 -- --
86.6 0.433 7.12 0.875 -- 0.317 -- -7.31 0.828 -- 27.66 5350 -- --
75.22 0.407 6.92 2.4 0.72 -- 0.694 -- 1.12 14.5 -- -- -- --
76.94 0.411 6.92 2.42 0.723 -- -- -- 1.13 14.6 -- -- -- --
90.82 0.444 6.86 2.78 -- -0.794 -- -- 1.4 -- 32.8 21266 -- --
132.76 0.537 7.08 -- 0.743 1.6 -- -- 0.38 14.5 4.28 47520 -- --
107.6 0.485 6.92 2.39 -- -- -- -- 1.11 -- -- -- -- --
231.02 0.711 6.98 -- 0.676 -- -- -- 0.857 14.5 -- -- -- --
165.2 0.599 7.09 -- -- 1.55 -- -- 0.38 -- 4.639 47520 -- --
257.92 0.75 6.98 -- -- -- -- -- 0.843 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 55.99 atmosphere 1000.0 270 > th dose independent rect. 6 18
2 56.03 radiation 1.0 270 < th dose independent rect. 1 10
3 56.04 temperature 15.0 270 > th dose independent rect. 6 18
6 56.27 radiation 1.0 270 < th dose dependent rect. 1 10
12 56.55 radiation 10.0 14400 < th dose dependent rect. 8 2
18 56.73 radiation 1.0 270 > th dose independent sin 5 NA
24 56.94 radiation 1.0 270 < th dose independent sin 5 NA
26 56.98 radiation 1.0 270 < th dose dependent sin 4 NA
33 57.16 wind 9.0 270 < th dose independent rect. 6 18
49 57.54 atmosphere 1000.0 270 > th dose independent rect. 18 7
52 57.57 atmosphere 1015.0 270 < th dose independent rect. 24 6
54 57.58 wind 9.0 270 < th dose independent rect. 24 6
55 57.58 temperature 10.0 270 > th dose independent rect. 24 6
57 57.58 temperature 30.0 270 < th dose independent rect. 24 6
58 57.58 humidity 50.0 270 > th dose independent rect. 24 6
61 57.58 atmosphere 995.0 270 > th dose independent rect. 24 6
62 57.58 radiation 20.0 270 < th dose independent rect. 24 6
71 57.65 radiation 40.0 270 < th dose dependent rect. 24 6
72 57.66 precipitation 0.1 270 < th dose independent rect. 6 18
73 57.66 precipitation 0.1 270 < th dose dependent rect. 6 18
79 57.76 wind 7.0 43200 < th dose independent rect. 7 2
81 57.77 precipitation 0.1 270 < th dose independent rect. 24 6
82 57.77 precipitation 0.1 270 < th dose dependent rect. 24 6
84 57.79 wind 7.0 43200 > th dose independent rect. 8 1
101 58.05 wind 5.0 43200 > th dose dependent rect. 7 2
104 58.09 radiation 10.0 14400 > th dose independent rect. 8 2
113 58.19 atmosphere 1015.0 270 < th dose dependent rect. 24 6
134 58.26 atmosphere 1015.0 270 < th dose dependent rect. 1 4
136 58.28 wind 9.0 270 < th dose dependent rect. 6 18
139 58.32 temperature 20.0 270 > th dose independent rect. 6 6
143 58.35 temperature 15.0 270 > th dose independent rect. 5 8
159 58.48 wind 7.0 270 < th dose independent rect. 5 8
160 58.49 temperature 15.0 270 > th dose independent rect. 19 16
169 58.54 radiation 1.0 270 > th dose independent rect. 5 8
180 58.54 wind 9.0 270 < th dose dependent rect. 6 7
221 58.71 atmosphere 1000.0 10 > th dose independent rect. 7 20
244 58.81 wind 7.0 270 < th dose independent rect. 19 16
259 58.92 wind 1.0 270 > th dose independent rect. 24 6
268 58.98 wind 1.0 270 > th dose independent rect. 11 8
297 59.14 radiation 1.0 270 > th dose independent rect. 6 5
299 59.14 radiation 20.0 270 < th dose dependent rect. 17 8
302 59.16 humidity 70.0 43200 > th dose independent rect. 17 13
307 59.17 atmosphere 1015.0 270 < th dose dependent rect. 12 18
310 59.18 radiation 10.0 270 < th dose dependent rect. 14 11
311 59.19 humidity 50.0 270 > th dose dependent rect. 24 6
322 59.26 radiation 1.0 270 < th dose independent rect. 18 7
324 59.27 wind 9.0 270 < th dose independent rect. 18 7
325 59.27 temperature 10.0 270 > th dose independent rect. 18 7
326 59.27 humidity 50.0 270 > th dose independent rect. 18 7
327 59.27 radiation 20.0 270 < th dose independent rect. 18 7
330 59.27 humidity 70.0 43200 < th dose independent rect. 17 13
331 59.27 temperature 10.0 270 > th dose independent rect. 1 17
332 59.27 atmosphere 1015.0 270 < th dose independent rect. 1 17
366 59.36 radiation 1.0 270 < th dose independent rect. 11 14
380 59.39 temperature 25.0 4320 < th dose independent rect. 7 1
397 59.44 humidity 60.0 43200 > th dose dependent rect. 16 18
401 59.46 humidity 60.0 43200 > th dose dependent rect. 21 1
417 59.49 wind 1.0 270 > th dose independent rect. 1 4
419 59.49 precipitation 0.1 270 < th dose independent rect. 17 8
420 59.49 humidity 60.0 43200 > th dose dependent rect. 17 8
421 59.49 precipitation 0.1 270 < th dose dependent rect. 17 8
422 59.49 radiation 1.0 270 < th dose dependent rect. 11 14
428 59.50 radiation 30.0 270 < th dose dependent rect. 15 10
430 59.50 humidity 50.0 43200 > th dose dependent rect. 15 12
449 59.54 humidity 60.0 43200 > th dose dependent rect. 18 5
470 59.57 wind 9.0 270 < th dose dependent rect. 24 6
480 59.60 temperature 10.0 270 > th dose independent rect. 11 8
481 59.60 atmosphere 1015.0 270 < th dose independent rect. 11 8
483 59.60 atmosphere 995.0 270 > th dose independent rect. 19 16
522 59.66 humidity 50.0 43200 > th dose dependent sin 15 NA
528 59.67 temperature 30.0 270 < th dose independent rect. 19 16
543 59.70 humidity 50.0 270 > th dose independent rect. 19 16
548 59.71 temperature 25.0 4320 > th dose independent rect. 7 1
587 59.77 temperature 30.0 270 < th dose independent rect. 18 7
625 59.83 temperature 25.0 1440 > th dose dependent rect. 7 1
626 59.83 temperature 10.0 270 > th dose dependent rect. 24 6
631 59.84 precipitation 0.1 270 < th dose independent rect. 19 16
636 59.84 precipitation 0.1 270 < th dose dependent rect. 19 16
637 59.85 precipitation 0.1 270 < th dose independent rect. 5 8
641 59.85 precipitation 0.1 270 < th dose dependent rect. 5 8
661 59.89 radiation 1.0 14400 > th dose independent rect. 4 6
678 59.90 precipitation 0.1 43200 > th dose independent rect. 6 11
679 59.90 precipitation 0.1 43200 > th dose independent rect. 4 14
682 59.90 humidity 90.0 43200 < th dose dependent rect. 16 11
696 59.91 precipitation 0.1 43200 < th dose independent rect. 4 14
704 59.91 precipitation 0.1 43200 < th dose dependent rect. 4 14
712 59.93 radiation 1.0 14400 < th dose independent rect. 24 10
715 59.93 precipitation 0.1 43200 < th dose independent rect. 6 11
730 59.93 humidity 90.0 43200 < th dose dependent rect. 17 7
731 59.93 precipitation 0.1 43200 < th dose dependent rect. 6 11
750 59.94 radiation 1.0 14400 < th dose independent rect. 4 6
790 59.96 wind 9.0 270 < th dose independent rect. 1 17
799 59.97 wind 5.0 43200 > th dose independent rect. 3 7
825 60.00 precipitation 0.1 270 < th dose independent rect. 1 16
828 60.00 precipitation 0.1 270 < th dose dependent rect. 1 16
832 60.01 atmosphere 995.0 270 > th dose independent rect. 5 8
833 60.01 atmosphere 1015.0 270 < th dose independent rect. 5 8
834 60.01 temperature 10.0 270 > th dose independent rect. 13 16
896 60.06 radiation 1.0 14400 > th dose independent sin 7 NA
929 60.09 temperature 25.0 4320 < th dose independent rect. 6 3
931 60.09 wind 9.0 270 < th dose independent rect. 11 8
977 60.10 wind 5.0 43200 > th dose dependent rect. 24 11
981 60.11 radiation 1.0 14400 < th dose independent sin 7 NA