Os02g0740900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD-40 repeat containing protein.
FiT-DB / Search/ Help/ Sample detail
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Os02g0740900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD-40 repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 308.07 | 0.825 | 4.96 | -1.84 | 0.49 | 1.79 | -1.68 | 1.38 | -0.0724 | 13.2 | 60.43 | 84 | 3.22 | 14.1 |
| 311.07 | 0.821 | 4.96 | -1.88 | 0.446 | 1.88 | -1.42 | -- | -0.0467 | 14.2 | 60.19 | 74 | 3.4 | 13.8 |
| 317.3 | 0.83 | 4.94 | -1.82 | 0.492 | 1.89 | -- | 0.966 | -0.0529 | 13.4 | 60.22 | 61 | 3.5 | 13.9 |
| 317.84 | 0.83 | 4.96 | -1.91 | 0.434 | 1.89 | -- | -- | -0.101 | 13.4 | 59.8 | 62 | 3.52 | 13.8 |
| 321.73 | 0.835 | 4.99 | -1.91 | -- | 1.94 | -- | 0.0958 | -0.151 | -- | 47.46 | 41 | 3.74 | 13.9 |
| 414.42 | 0.954 | 4.94 | -1.87 | 1.36 | -- | -0.513 | -- | -0.129 | 9.16 | -- | -- | -- | -- |
| 415.27 | 0.954 | 4.94 | -1.89 | 1.36 | -- | -- | -- | -0.13 | 9.06 | -- | -- | -- | -- |
| 321.71 | 0.835 | 4.99 | -1.91 | -- | 1.94 | -- | -- | -0.151 | -- | 47.26 | 40 | 3.75 | 13.9 |
| 413.44 | 0.947 | 4.93 | -- | 0.462 | 1.9 | -- | -- | 0.104 | 13.6 | 59.79 | 61 | 3.59 | 13.8 |
| 522.17 | 1.07 | 4.98 | -1.89 | -- | -- | -- | -- | -0.122 | -- | -- | -- | -- | -- |
| 509.61 | 1.06 | 4.9 | -- | 1.36 | -- | -- | -- | 0.0806 | 9.16 | -- | -- | -- | -- |
| 416.98 | 0.951 | 4.95 | -- | -- | 1.94 | -- | -- | 0.063 | -- | 45.88 | 39 | 3.78 | 13.9 |
| 616.84 | 1.16 | 4.93 | -- | -- | -- | -- | -- | 0.0881 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 310.30 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 3 | 14 |
| 5 | 315.97 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 4 | 13 |
| 20 | 320.70 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 13 |
| 25 | 321.25 | humidity | 70.0 | 90 | > th | dose independent | rect. | 3 | 14 |
| 45 | 324.38 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 15 |
| 48 | 325.10 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 13 |
| 71 | 327.33 | humidity | 60.0 | 30 | > th | dose dependent | sin | 2 | NA |
| 103 | 329.72 | humidity | 80.0 | 10 | > th | dose independent | rect. | 4 | 14 |
| 123 | 330.39 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 15 |
| 197 | 332.76 | radiation | 20.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 201 | 332.94 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 20 |
| 271 | 335.26 | radiation | 30.0 | 90 | < th | dose dependent | sin | 3 | NA |
| 280 | 335.54 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 282 | 335.59 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 21 |
| 283 | 335.65 | radiation | 10.0 | 270 | > th | dose independent | sin | 7 | NA |
| 323 | 336.45 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 356 | 337.23 | radiation | 10.0 | 270 | > th | dose independent | rect. | 17 | 18 |
| 357 | 337.27 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 378 | 337.62 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 10 |
| 380 | 337.64 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 21 |
| 381 | 337.64 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 387 | 337.79 | radiation | 10.0 | 270 | > th | dose independent | rect. | 6 | 5 |
| 429 | 338.37 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 20 |
| 430 | 338.37 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 499 | 339.45 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 15 |
| 526 | 339.97 | radiation | 1.0 | 270 | < th | dose independent | sin | 3 | NA |
| 537 | 340.16 | radiation | 1.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 545 | 340.27 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 13 |
| 553 | 340.36 | radiation | 1.0 | 270 | > th | dose independent | sin | 3 | NA |
| 574 | 340.81 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 19 |
| 614 | 341.39 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 616 | 341.42 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 16 | 19 |
| 649 | 342.00 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 6 | 5 |
| 662 | 342.15 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 4 | 8 |
| 670 | 342.25 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 677 | 342.32 | wind | 7.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 685 | 342.38 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 4 | 7 |
| 718 | 342.60 | radiation | 10.0 | 270 | < th | dose independent | sin | 8 | NA |
| 729 | 342.77 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 5 |
| 750 | 343.02 | humidity | 90.0 | 30 | < th | dose dependent | sin | 3 | NA |
| 773 | 343.22 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 21 |
| 778 | 343.31 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 782 | 343.36 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 4 |
| 783 | 343.36 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 802 | 343.52 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 805 | 343.52 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 808 | 343.52 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 809 | 343.52 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 811 | 343.52 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 817 | 343.53 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 819 | 343.55 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 827 | 343.64 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 833 | 343.68 | temperature | 15.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 837 | 343.71 | wind | 9.0 | 90 | < th | dose independent | rect. | 7 | 20 |
| 867 | 343.95 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 879 | 344.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 10 |
| 881 | 344.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 10 |
| 909 | 344.27 | radiation | 10.0 | 10 | < th | dose independent | rect. | 4 | 4 |
| 929 | 344.57 | radiation | 1.0 | 90 | > th | dose dependent | sin | 4 | NA |
| 944 | 344.73 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 2 |
| 961 | 344.86 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 968 | 344.95 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 7 |
| 969 | 344.95 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 976 | 345.11 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 991 | 345.25 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 4 | 5 |