Os02g0730400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0730400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 186.25 | 0.641 | 5.33 | -0.386 | 2.47 | -3.29 | -2.45 | 3.64 | -0.165 | 10.5 | 30.54 | 14 | 20 | -- |
| 193.45 | 0.648 | 5.31 | -0.156 | 2.16 | -3.4 | -1.06 | -- | -0.119 | 10.8 | 28.52 | 17 | 19.6 | -- |
| 196.91 | 0.654 | 5.31 | -0.224 | 2.16 | -3.26 | -- | 0.766 | -0.118 | 10.8 | 28.61 | 11 | 19.8 | -- |
| 197.47 | 0.654 | 5.3 | -0.167 | 2.17 | -3.37 | -- | -- | -0.0991 | 10.9 | 28.55 | 10 | 19.5 | -- |
| 301.22 | 0.808 | 5.46 | -0.108 | -- | -2.56 | -- | 0.988 | 0.0411 | -- | 36.69 | 531 | 11.4 | -- |
| 285.03 | 0.791 | 5.24 | 0.319 | 1.61 | -- | -0.193 | -- | 0.265 | 12 | -- | -- | -- | -- |
| 285.19 | 0.791 | 5.24 | 0.311 | 1.61 | -- | -- | -- | 0.264 | 12 | -- | -- | -- | -- |
| 279.75 | 0.779 | 5.32 | 0.127 | -- | -2.32 | -- | -- | 0.169 | -- | 80.67 | 674 | 11.8 | -- |
| 198.19 | 0.656 | 5.3 | -- | 2.15 | -3.31 | -- | -- | -0.0778 | 10.9 | 28.52 | 10 | 19.6 | -- |
| 449.29 | 0.99 | 5.28 | 0.261 | -- | -- | -- | -- | 0.241 | -- | -- | -- | -- | -- |
| 287.74 | 0.793 | 5.25 | -- | 1.61 | -- | -- | -- | 0.229 | 12 | -- | -- | -- | -- |
| 262.61 | 0.755 | 5.29 | -- | -- | -3.03 | -- | -- | 0.232 | -- | 118.5 | 1282 | 16.6 | -- |
| 451.08 | 0.991 | 5.28 | -- | -- | -- | -- | -- | 0.212 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 186.54 | temperature | 30 | 10 | < th | dose dependent | sin | 2 | NA |
| 3 | 188.22 | temperature | 10 | 10 | > th | dose dependent | sin | 2 | NA |
| 10 | 189.66 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 17 |
| 71 | 198.04 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 14 |
| 116 | 202.57 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 12 |
| 188 | 206.95 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 10 |
| 194 | 207.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 21 |
| 230 | 208.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 254 | 210.03 | temperature | 25 | 90 | > th | dose independent | sin | 2 | NA |
| 258 | 210.25 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 12 |
| 276 | 210.93 | temperature | 25 | 90 | < th | dose independent | sin | 1 | NA |
| 307 | 211.87 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 321 | 212.44 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 352 | 213.38 | wind | 5 | 14400 | > th | dose independent | rect. | 5 | 13 |
| 358 | 213.46 | wind | 5 | 14400 | < th | dose independent | rect. | 5 | 12 |
| 379 | 213.98 | wind | 5 | 14400 | > th | dose independent | rect. | 5 | 16 |
| 423 | 214.65 | wind | 5 | 14400 | > th | dose independent | sin | 23 | NA |
| 450 | 214.98 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 460 | 215.07 | wind | 5 | 14400 | < th | dose independent | sin | 23 | NA |
| 468 | 215.15 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 490 | 215.35 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 11 |
| 494 | 215.36 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 13 |
| 510 | 215.53 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 522 | 215.64 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 535 | 215.79 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 547 | 215.86 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 564 | 216.01 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 586 | 216.24 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 615 | 216.44 | temperature | 25 | 90 | > th | dose independent | rect. | 6 | 9 |
| 623 | 216.47 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 20 |
| 631 | 216.52 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 5 |
| 638 | 216.56 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 16 |
| 665 | 216.76 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 699 | 216.93 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 20 |
| 738 | 217.24 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 11 |
| 777 | 217.44 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 22 |
| 812 | 217.63 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 14 |
| 850 | 217.85 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 17 |
| 883 | 218.01 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 895 | 218.10 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 909 | 218.20 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 16 |
| 937 | 218.31 | wind | 5 | 14400 | > th | dose dependent | rect. | 5 | 16 |