Os02g0728300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Longevity-assurance protein (LAG1) domain containing protein.
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Os02g0728300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Longevity-assurance protein (LAG1) domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 492.12 | 1.04 | 10.3 | -1.13 | 1.63 | 3.37 | -0.658 | 8.35 | -2.13 | 4.19 | 19.6 | 6184 | 7.91 | -- |
| 593.8 | 1.14 | 10.1 | -1.15 | 1.57 | 0.499 | -0.64 | -- | -2.27 | 4.46 | 19.6 | 6184 | 7.91 | -- |
| 479.22 | 1.02 | 10.4 | -0.818 | 1.57 | 3.91 | -- | 9.39 | -2.08 | 4.07 | 19.2 | 7507 | 6.58 | -- |
| 540.13 | 1.08 | 9.96 | -0.864 | 1.68 | 1.27 | -- | -- | -1.87 | 3.93 | 22.5 | 1244 | 8.79 | -- |
| 622.35 | 1.16 | 10.4 | -0.751 | -- | 3.97 | -- | 9.49 | -2.06 | -- | 19.2 | 7559 | 6.68 | -- |
| 598.49 | 1.15 | 10.1 | -1.23 | 1.62 | -- | -0.573 | -- | -2.32 | 4.23 | -- | -- | -- | -- |
| 599.37 | 1.15 | 10.1 | -1.22 | 1.61 | -- | -- | -- | -2.32 | 4.17 | -- | -- | -- | -- |
| 599.3 | 1.14 | 10.1 | -1.23 | -- | 1.63 | -- | -- | -2.32 | -- | 35.1 | 852 | 8.96 | -- |
| 556.51 | 1.1 | 9.96 | -- | 1.62 | 1.44 | -- | -- | -1.78 | 4 | 22.4 | 1305 | 10.5 | -- |
| 739.93 | 1.27 | 10.1 | -1.16 | -- | -- | -- | -- | -2.28 | -- | -- | -- | -- | -- |
| 638.82 | 1.18 | 10 | -- | 1.59 | -- | -- | -- | -2.18 | 4.18 | -- | -- | -- | -- |
| 638.82 | 1.18 | 10.1 | -- | -- | 1.59 | -- | -- | -2.18 | -- | 44.17 | 864 | 9.02 | -- |
| 775.34 | 1.3 | 10.1 | -- | -- | -- | -- | -- | -2.15 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 486.07 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 2 | 495.91 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 4 | 496.68 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 5 | 497.25 | wind | 7.0 | 1440 | < th | dose dependent | rect. | 8 | 3 |
| 6 | 497.52 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 8 | 3 |
| 7 | 497.59 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 10 | 498.01 | temperature | 25.0 | 720 | < th | dose dependent | sin | 20 | NA |
| 15 | 500.25 | wind | 3.0 | 1440 | < th | dose independent | rect. | 8 | 5 |
| 16 | 500.32 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 17 | 500.43 | wind | 5.0 | 1440 | < th | dose dependent | rect. | 8 | 5 |
| 19 | 500.86 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 11 | 15 |
| 20 | 500.89 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 21 | 500.92 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 13 | 9 |
| 22 | 500.94 | wind | 3.0 | 1440 | < th | dose independent | rect. | 8 | 3 |
| 23 | 501.11 | wind | 3.0 | 1440 | > th | dose independent | rect. | 8 | 3 |
| 26 | 501.35 | wind | 3.0 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 27 | 501.47 | wind | 3.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 32 | 501.76 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 42 | 502.47 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 11 | 12 |
| 48 | 502.81 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 6 |
| 59 | 503.11 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 60 | 503.15 | wind | 3.0 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 62 | 503.17 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 12 | 20 |
| 86 | 504.13 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 8 | 5 |
| 106 | 504.63 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 146 | 505.90 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 2 | 1 |
| 166 | 506.42 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 184 | 506.80 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 18 |
| 189 | 506.91 | wind | 7.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 221 | 507.74 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 271 | 508.80 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 19 | 17 |
| 272 | 508.84 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 19 |
| 290 | 509.15 | temperature | 20.0 | 4320 | < th | dose independent | sin | 15 | NA |
| 297 | 509.27 | temperature | 25.0 | 720 | < th | dose independent | rect. | 11 | 16 |
| 329 | 509.91 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 344 | 510.11 | temperature | 20.0 | 4320 | > th | dose independent | sin | 15 | NA |
| 359 | 510.52 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 370 | 510.68 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 385 | 510.88 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 2 | 10 |
| 413 | 511.46 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 433 | 511.85 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 443 | 511.96 | wind | 5.0 | 1440 | > th | dose independent | rect. | 20 | 15 |
| 451 | 512.11 | wind | 5.0 | 1440 | < th | dose independent | rect. | 20 | 17 |
| 456 | 512.18 | wind | 7.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 461 | 512.23 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 495 | 512.73 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 1 | 3 |
| 510 | 512.88 | wind | 5.0 | 1440 | < th | dose independent | rect. | 20 | 15 |
| 517 | 512.94 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 615 | 514.39 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 21 | 3 |
| 661 | 515.12 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 673 | 515.25 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 20 | 17 |
| 687 | 515.54 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 705 | 515.85 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 708 | 515.87 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 723 | 515.98 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 807 | 517.18 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 20 | 15 |
| 841 | 517.52 | wind | 5.0 | 1440 | > th | dose independent | sin | 8 | NA |
| 908 | 518.24 | wind | 5.0 | 1440 | < th | dose independent | sin | 8 | NA |
| 919 | 518.36 | temperature | 25.0 | 720 | < th | dose independent | sin | 17 | NA |
| 947 | 518.56 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 970 | 518.80 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 1 | 11 |