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Os02g0727500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.7 (0.0135) R2 : 0.0296
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.106 (0.0285) R2dN8 : 0.0382 R2N8 : 0.0296
σ : 0.255
deviance : 29.85
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
11.03 0.156 13.8 -0.513 0.477 0.265 0.0381 -1.51 -0.0622 24 19.34 3781 -- --
12.78 0.167 13.7 -0.129 0.491 0.278 -0.0383 -- 0.0541 23.7 17.73 4311 -- --
10.92 0.154 13.8 -0.496 0.472 0.274 -- -1.49 -0.0616 0.0844 18.32 2198 -- --
12.53 0.165 13.7 -0.145 0.484 0.313 -- -- 0.0436 24 12.75 4830 -- --
24.07 0.229 13.8 -0.696 -- 0.479 -- -1.88 -0.134 -- 21.08 2321 -- --
14.21 0.177 13.7 -7.14e-05 0.498 -- -0.0304 -- 0.101 24 -- -- -- --
14.22 0.177 13.7 0.00115 0.498 -- -- -- 0.101 24 -- -- -- --
25.98 0.237 13.7 -0.15 -- 0.437 -- -- 0.0193 -- 13.99 2382 -- --
12.93 0.167 13.7 -- 0.488 0.231 -- -- 0.0666 23.9 12.66 4310 -- --
29.85 0.255 13.7 0.0165 -- -- -- -- 0.108 -- -- -- -- --
14.22 0.176 13.7 -- 0.498 -- -- -- 0.101 24 -- -- -- --
26.48 0.24 13.7 -- -- 0.373 -- -- 0.0464 -- 13.76 2373 -- --
29.85 0.255 13.7 -- -- -- -- -- 0.106 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 10.15 humidity 90 14400 > th dose independent rect. 23 2
2 10.18 humidity 90 14400 < th dose independent rect. 23 2
4 10.20 humidity 80 43200 < th dose independent rect. 17 1
5 10.23 humidity 90 14400 > th dose dependent rect. 24 1
7 10.27 temperature 15 43200 < th dose independent rect. 6 1
8 10.27 humidity 80 43200 > th dose independent rect. 17 2
10 10.29 temperature 15 43200 > th dose independent rect. 6 1
14 10.29 radiation 1 14400 < th dose dependent rect. 4 3
15 10.29 radiation 1 14400 < th dose dependent rect. 24 7
26 10.31 humidity 90 14400 > th dose independent rect. 22 5
38 10.32 radiation 1 14400 < th dose dependent rect. 6 1
67 10.36 radiation 1 14400 < th dose dependent sin 10 NA
69 10.36 temperature 15 43200 < th dose dependent rect. 5 1
73 10.36 temperature 15 43200 < th dose dependent rect. 4 4
77 10.36 radiation 1 14400 < th dose dependent rect. 16 15
82 10.37 atmosphere 1015 43200 < th dose independent rect. 14 3
86 10.37 atmosphere 1015 43200 > th dose independent rect. 13 5
122 10.37 radiation 1 14400 < th dose dependent rect. 17 22
123 10.38 temperature 15 43200 < th dose independent sin 0 NA
127 10.38 atmosphere 1015 43200 > th dose independent rect. 12 1
130 10.38 atmosphere 1015 43200 < th dose independent rect. 13 1
152 10.38 temperature 15 43200 > th dose independent rect. 5 11
176 10.38 humidity 90 14400 > th dose dependent rect. 22 5
193 10.38 radiation 1 14400 < th dose dependent rect. 13 19
219 10.39 temperature 15 43200 > th dose independent rect. 5 9
255 10.39 temperature 15 43200 < th dose independent rect. 13 20
268 10.39 temperature 15 43200 < th dose dependent sin 3 NA
302 10.39 radiation 1 14400 < th dose dependent rect. 23 16
319 10.39 radiation 1 14400 < th dose dependent rect. 10 21
325 10.40 temperature 15 43200 > th dose independent sin 22 NA
330 10.40 temperature 15 43200 < th dose independent sin 21 NA
334 10.40 temperature 15 43200 < th dose independent no NA NA
360 10.40 temperature 15 43200 < th dose independent rect. 16 16
366 10.40 temperature 15 43200 < th dose independent rect. 14 17
411 10.40 temperature 15 43200 < th dose independent rect. 20 22
419 10.40 temperature 15 43200 < th dose independent rect. 8 23
441 10.40 radiation 1 14400 < th dose dependent rect. 4 11
454 10.40 humidity 90 14400 > th dose dependent rect. 23 16
489 10.41 temperature 15 43200 < th dose independent sin 19 NA
491 10.41 temperature 15 43200 > th dose independent rect. 17 1
492 10.41 temperature 15 43200 < th dose independent rect. 17 1
499 10.41 atmosphere 1015 43200 < th dose independent rect. 18 1
520 10.41 temperature 15 43200 > th dose independent rect. 11 7
521 10.41 temperature 15 43200 < th dose independent rect. 11 7
545 10.41 temperature 15 43200 < th dose independent rect. 19 13
549 10.41 temperature 15 43200 < th dose independent rect. 17 14
671 10.42 temperature 15 43200 > th dose independent sin 18 NA
675 10.42 temperature 15 43200 > th dose independent no NA NA
686 10.42 temperature 15 43200 > th dose independent rect. 8 1
687 10.42 temperature 15 43200 < th dose independent rect. 3 1
689 10.42 temperature 15 43200 > th dose independent rect. 12 2
693 10.42 temperature 15 43200 < th dose independent rect. 12 2
703 10.42 temperature 15 43200 > th dose independent rect. 12 4
716 10.42 temperature 15 43200 < th dose independent rect. 11 5
717 10.42 temperature 15 43200 < th dose independent rect. 13 5
871 10.42 temperature 15 43200 > th dose independent rect. 13 18
901 10.42 temperature 15 43200 > th dose independent rect. 22 21
925 10.42 temperature 15 43200 > th dose independent rect. 15 23
931 10.42 temperature 15 43200 < th dose dependent no NA NA
933 10.42 radiation 1 14400 < th dose dependent no NA NA
934 10.42 wind 9 43200 > th dose dependent rect. 5 1
942 10.42 humidity 90 14400 > th dose dependent rect. 23 12
947 10.42 temperature 15 43200 < th dose dependent rect. 17 15
952 10.42 radiation 1 14400 < th dose dependent rect. 4 15