Os02g0721600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to WD-repeat protein-like.
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Os02g0721600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to WD-repeat protein-like.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8.83 | 0.14 | 11.7 | 0.111 | 0.366 | -0.225 | -0.0994 | 0.195 | 0.0816 | 5.38 | 12.19 | 103 | -- | -- |
| 8.97 | 0.139 | 11.7 | 0.115 | 0.36 | -0.222 | -0.185 | -- | 0.0777 | 5.23 | 12.52 | 121 | -- | -- |
| 8.85 | 0.139 | 11.7 | 0.112 | 0.364 | -0.226 | -- | 0.21 | 0.0821 | 5.41 | 12.18 | 104 | -- | -- |
| 9.04 | 0.14 | 11.7 | 0.117 | 0.358 | -0.226 | -- | -- | 0.0797 | 5.39 | 12.53 | 117 | -- | -- |
| 10.53 | 0.151 | 11.7 | 0.165 | -- | -0.478 | -- | 0.459 | 0.0587 | -- | 0.66 | 495 | -- | -- |
| 10.27 | 0.15 | 11.7 | 0.0801 | 0.485 | -- | -0.244 | -- | 0.058 | 3.82 | -- | -- | -- | -- |
| 10.45 | 0.151 | 11.7 | 0.0836 | 0.484 | -- | -- | -- | 0.0593 | 3.85 | -- | -- | -- | -- |
| 10.42 | 0.15 | 11.7 | 0.14 | -- | -0.477 | -- | -- | 0.0908 | -- | 0.65 | 512 | -- | -- |
| 9.36 | 0.143 | 11.7 | -- | 0.37 | -0.211 | -- | -- | 0.0665 | 5.12 | 14.99 | 114 | -- | -- |
| 23.33 | 0.226 | 11.7 | 0.104 | -- | -- | -- | -- | 0.0722 | -- | -- | -- | -- | -- |
| 10.63 | 0.153 | 11.7 | -- | 0.486 | -- | -- | -- | 0.05 | 3.85 | -- | -- | -- | -- |
| 10.75 | 0.153 | 11.7 | -- | -- | -0.464 | -- | -- | 0.0748 | -- | 1.869 | 473 | -- | -- |
| 23.61 | 0.227 | 11.7 | -- | -- | -- | -- | -- | 0.0608 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 7.90 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 9 |
| 8 | 8.15 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 6 | 15 |
| 20 | 8.24 | radiation | 10.0 | 30 | < th | dose independent | rect. | 6 | 15 |
| 24 | 8.27 | humidity | 90.0 | 90 | < th | dose independent | rect. | 8 | 9 |
| 28 | 8.28 | radiation | 1.0 | 90 | > th | dose independent | rect. | 8 | 9 |
| 36 | 8.31 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 9 |
| 38 | 8.32 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 17 | 15 |
| 39 | 8.32 | radiation | 20.0 | 90 | < th | dose independent | rect. | 17 | 15 |
| 45 | 8.34 | temperature | 15.0 | 90 | > th | dose independent | rect. | 8 | 9 |
| 46 | 8.34 | radiation | 1.0 | 10 | > th | dose independent | rect. | 8 | 10 |
| 48 | 8.35 | humidity | 50.0 | 90 | > th | dose independent | rect. | 8 | 9 |
| 49 | 8.35 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 9 |
| 50 | 8.35 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 9 |
| 61 | 8.36 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 66 | 8.37 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 9 |
| 67 | 8.37 | temperature | 10.0 | 90 | > th | dose independent | rect. | 17 | 15 |
| 82 | 8.40 | wind | 9.0 | 90 | < th | dose independent | rect. | 17 | 15 |
| 83 | 8.40 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 17 | 15 |
| 86 | 8.41 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 22 | 5 |
| 90 | 8.42 | radiation | 10.0 | 30 | < th | dose independent | rect. | 6 | 17 |
| 92 | 8.42 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 17 | 16 |
| 95 | 8.43 | wind | 1.0 | 90 | > th | dose independent | rect. | 17 | 15 |
| 96 | 8.43 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 103 | 8.45 | wind | 1.0 | 90 | > th | dose independent | rect. | 8 | 9 |
| 113 | 8.46 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 115 | 8.47 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 116 | 8.47 | radiation | 20.0 | 30 | < th | dose dependent | sin | 21 | NA |
| 127 | 8.48 | humidity | 50.0 | 90 | > th | dose independent | rect. | 17 | 15 |
| 183 | 8.52 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 18 |
| 215 | 8.54 | radiation | 20.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 224 | 8.54 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 21 | 20 |
| 228 | 8.55 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 9 |
| 229 | 8.55 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 17 | 15 |
| 231 | 8.55 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 234 | 8.55 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 9 |
| 238 | 8.55 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 17 | 15 |
| 259 | 8.57 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 15 |
| 277 | 8.58 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 288 | 8.59 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 9 |
| 305 | 8.60 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 5 |
| 309 | 8.60 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 6 | 15 |
| 311 | 8.60 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 5 |
| 321 | 8.61 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 6 |
| 372 | 8.62 | radiation | 20.0 | 90 | < th | dose independent | rect. | 15 | 20 |
| 379 | 8.63 | radiation | 10.0 | 30 | > th | dose independent | sin | 21 | NA |
| 382 | 8.63 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 383 | 8.63 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 384 | 8.63 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 386 | 8.63 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 387 | 8.63 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 398 | 8.63 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 399 | 8.63 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 400 | 8.63 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 406 | 8.63 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 8 |
| 418 | 8.64 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 425 | 8.64 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 441 | 8.65 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 9 |
| 445 | 8.65 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 18 | 15 |
| 448 | 8.65 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 18 | 15 |
| 454 | 8.65 | radiation | 40.0 | 10 | < th | dose independent | rect. | 6 | 15 |
| 465 | 8.65 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 15 |
| 466 | 8.65 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 6 | 15 |
| 538 | 8.67 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 5 | 6 |
| 564 | 8.68 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 577 | 8.68 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 23 | 18 |
| 581 | 8.69 | radiation | 10.0 | 30 | < th | dose independent | sin | 21 | NA |
| 593 | 8.69 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 617 | 8.69 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 14 | 18 |
| 653 | 8.70 | radiation | 20.0 | 270 | < th | dose dependent | sin | 3 | NA |
| 655 | 8.70 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 14 | 6 |
| 681 | 8.71 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 690 | 8.71 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 18 |
| 706 | 8.71 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 18 |
| 867 | 8.74 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 2 | 6 |
| 880 | 8.74 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 904 | 8.75 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 17 | 15 |
| 915 | 8.75 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 5 | 2 |
| 940 | 8.76 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 8 |
| 943 | 8.76 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 8 |
| 947 | 8.76 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 22 | 8 |
| 955 | 8.76 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 22 | 8 |
| 956 | 8.76 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 22 | 8 |
| 971 | 8.76 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 16 |