Os02g0719700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : IQ calmodulin-binding region domain containing protein.
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Os02g0719700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : IQ calmodulin-binding region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 154.1 | 0.583 | 8.67 | -1.66 | 2.16 | 3.18 | -0.508 | -1.36 | -0.932 | 12.7 | 15.6 | 587 | -- | -- |
| 155.33 | 0.58 | 8.64 | -1.43 | 2.15 | 3.27 | -0.383 | -- | -0.869 | 12.7 | 14.84 | 587 | -- | -- |
| 155.15 | 0.58 | 8.67 | -1.64 | 2.14 | 3.21 | -- | -1.16 | -0.925 | 12.7 | 15.4 | 580 | -- | -- |
| 156.05 | 0.582 | 8.64 | -1.44 | 2.16 | 3.25 | -- | -- | -0.869 | 12.7 | 14.9 | 588 | -- | -- |
| 219.3 | 0.69 | 8.73 | -1.8 | -- | 3.84 | -- | -1.9 | -1.05 | -- | 18.6 | 12 | -- | -- |
| 284.07 | 0.79 | 8.55 | -0.649 | 2.17 | -- | -0.301 | -- | -0.369 | 14.2 | -- | -- | -- | -- |
| 284.4 | 0.79 | 8.55 | -0.658 | 2.17 | -- | -- | -- | -0.37 | 14.2 | -- | -- | -- | -- |
| 222.57 | 0.695 | 8.72 | -1.6 | -- | 4.24 | -- | -- | -1.08 | -- | 17.44 | 12 | -- | -- |
| 206.33 | 0.669 | 8.6 | -- | 2.21 | 2.92 | -- | -- | -0.684 | 12.8 | 14.23 | 585 | -- | -- |
| 565.82 | 1.11 | 8.57 | -0.749 | -- | -- | -- | -- | -0.423 | -- | -- | -- | -- | -- |
| 295.81 | 0.805 | 8.54 | -- | 2.19 | -- | -- | -- | -0.297 | 14.2 | -- | -- | -- | -- |
| 280.67 | 0.783 | 8.66 | -- | -- | 3.49 | -- | -- | -0.823 | -- | 20.69 | 18 | -- | -- |
| 580.63 | 1.12 | 8.55 | -- | -- | -- | -- | -- | -0.34 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 149.16 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 7 | 150.40 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 10 | 150.67 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 13 | 150.84 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 19 | 151.09 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 8 |
| 73 | 153.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 21 |
| 87 | 153.44 | temperature | 20 | 1440 | > th | dose dependent | sin | 19 | NA |
| 103 | 153.98 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 178 | 155.40 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 199 | 155.69 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 210 | 155.81 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 21 |
| 219 | 155.91 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 345 | 157.08 | temperature | 15 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 452 | 157.85 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 696 | 159.39 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 6 |
| 812 | 160.18 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 21 |