Os02g0719000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Rho GDP-dissociation inhibitor 1 (Rho GDI-1) (AtRhoGDI1).
FiT-DB / Search/ Help/ Sample detail
|
Os02g0719000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Rho GDP-dissociation inhibitor 1 (Rho GDI-1) (AtRhoGDI1).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 214.25 | 0.688 | 3.19 | 0.0696 | 0.46 | 2.42 | -0.365 | 6.23 | -0.00164 | 2.18 | 0.943 | 93 | 3.98 | 0.35 |
| 214.05 | 0.681 | 3.21 | -0.179 | 0.454 | 3.1 | -0.343 | -- | -0.00181 | 2.05 | 1.044 | 92 | 3.97 | 0.367 |
| 214.03 | 0.681 | 3.19 | 0.0757 | 0.461 | 2.42 | -- | 6.05 | -0.00188 | 2.36 | 0.9062 | 92 | 3.97 | 0.337 |
| 214.43 | 0.682 | 3.21 | -0.179 | 0.455 | 3.09 | -- | -- | -0.00414 | 2.32 | 1.04 | 92 | 3.97 | 0.36 |
| 225.73 | 0.7 | 3.19 | 0.0318 | -- | 2.77 | -- | 4.84 | 0.0225 | -- | 0.9 | 93 | 3.97 | 0.331 |
| 359.71 | 0.889 | 3.23 | -0.0058 | 0.956 | -- | 0.85 | -- | -0.141 | 4.02 | -- | -- | -- | -- |
| 361.63 | 0.891 | 3.24 | -0.0167 | 0.958 | -- | -- | -- | -0.146 | 3.81 | -- | -- | -- | -- |
| 225.98 | 0.7 | 3.21 | -0.172 | -- | 3.28 | -- | -- | 0.0141 | -- | 1.03 | 93 | 3.98 | 0.336 |
| 215.26 | 0.683 | 3.21 | -- | 0.454 | 3.07 | -- | -- | 0.015 | 2.33 | 1.043 | 92 | 3.97 | 0.363 |
| 412.17 | 0.949 | 3.24 | 0.023 | -- | -- | -- | -- | -0.12 | -- | -- | -- | -- | -- |
| 361.64 | 0.89 | 3.24 | -- | 0.958 | -- | -- | -- | -0.144 | 3.81 | -- | -- | -- | -- |
| 226.75 | 0.701 | 3.2 | -- | -- | 3.27 | -- | -- | 0.0326 | -- | 1.016 | 93 | 3.98 | 0.346 |
| 412.18 | 0.948 | 3.24 | -- | -- | -- | -- | -- | -0.123 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 242.06 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 15 | 242.20 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 16 | 246.21 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 32 | 251.77 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 33 | 252.75 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 37 | 258.00 | humidity | 70.0 | 720 | < th | dose independent | rect. | 19 | 12 |
| 38 | 258.05 | humidity | 70.0 | 720 | < th | dose independent | rect. | 19 | 1 |
| 49 | 261.24 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 19 | 12 |
| 50 | 261.28 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 62 | 261.59 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 8 |
| 64 | 261.98 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 80 | 263.88 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 102 | 266.04 | wind | 3.0 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 105 | 266.63 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 110 | 267.84 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 114 | 268.43 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 115 | 268.72 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 139 | 271.75 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 222 | 275.21 | temperature | 25.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 249 | 276.87 | wind | 1.0 | 10 | > th | dose independent | sin | 4 | NA |
| 264 | 277.75 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 4 |
| 271 | 278.05 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 12 |
| 306 | 279.39 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 323 | 280.71 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 15 |
| 335 | 281.25 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 356 | 282.10 | temperature | 20.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 373 | 282.95 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 454 | 285.11 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 8 |
| 471 | 285.41 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 10 |
| 478 | 285.64 | wind | 3.0 | 10 | < th | dose dependent | rect. | 24 | 6 |
| 487 | 286.00 | wind | 1.0 | 10 | < th | dose independent | rect. | 4 | 14 |
| 491 | 286.01 | wind | 1.0 | 10 | < th | dose independent | rect. | 4 | 12 |
| 547 | 287.41 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 576 | 288.00 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 582 | 288.17 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 583 | 288.17 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 591 | 288.40 | wind | 9.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 592 | 288.40 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 595 | 288.40 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 598 | 288.40 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 599 | 288.40 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 601 | 288.40 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 606 | 288.40 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 611 | 288.44 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 614 | 288.46 | radiation | 1.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 665 | 289.05 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 669 | 289.22 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 7 |
| 707 | 290.36 | wind | 1.0 | 10 | < th | dose independent | sin | 4 | NA |
| 708 | 290.37 | humidity | 70.0 | 720 | > th | dose independent | sin | 12 | NA |
| 717 | 290.61 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 13 |
| 747 | 291.23 | humidity | 70.0 | 720 | < th | dose independent | sin | 12 | NA |
| 803 | 291.99 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 847 | 292.86 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 965 | 295.05 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 18 | 11 |