Os02g0717900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : MSF1 domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0717900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : MSF1 domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.53 | 0.317 | 10.2 | -0.477 | 1.42 | 2.53 | -0.45 | -1.55 | -0.171 | 19 | 0.4213 | 712 | -- | -- |
| 46.3 | 0.317 | 10.2 | -0.503 | 1.59 | 2.71 | 0.756 | -- | -0.172 | 18.5 | 0.42 | 694 | -- | -- |
| 45.65 | 0.315 | 10.2 | -0.479 | 1.46 | 2.57 | -- | -1.11 | -0.172 | 18.9 | 0.43 | 709 | -- | -- |
| 47.56 | 0.321 | 10.2 | -0.503 | 1.58 | 2.7 | -- | -- | -0.169 | 18.7 | 0.43 | 705 | -- | -- |
| 58.17 | 0.355 | 10.2 | -0.205 | -- | 1.92 | -- | -0.537 | -0.0549 | -- | 0.4961 | 3361 | -- | -- |
| 59.85 | 0.363 | 10.2 | -0.752 | 0.866 | -- | -0.839 | -- | -0.3 | 3.28 | -- | -- | -- | -- |
| 62.11 | 0.369 | 10.2 | -0.736 | 0.862 | -- | -- | -- | -0.295 | 3.28 | -- | -- | -- | -- |
| 54.9 | 0.345 | 10.2 | -0.44 | -- | 1.65 | -- | -- | -0.0849 | -- | 0.4623 | 3331 | -- | -- |
| 53.63 | 0.341 | 10.3 | -- | 1.88 | 3.11 | -- | -- | -0.145 | 18.6 | 0.19 | 707 | -- | -- |
| 104.16 | 0.477 | 10.2 | -0.699 | -- | -- | -- | -- | -0.273 | -- | -- | -- | -- | -- |
| 76.37 | 0.409 | 10.2 | -- | 0.848 | -- | -- | -- | -0.213 | 3.28 | -- | -- | -- | -- |
| 59.34 | 0.359 | 10.2 | -- | -- | 1.74 | -- | -- | -0.0488 | -- | 0.3691 | 3343 | -- | -- |
| 117.05 | 0.505 | 10.2 | -- | -- | -- | -- | -- | -0.195 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.33 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 18 | 2 |
| 2 | 42.34 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 18 | 2 |
| 5 | 42.95 | humidity | 70.0 | 90 | > th | dose independent | rect. | 18 | 2 |
| 12 | 43.44 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 15 | 5 |
| 14 | 43.49 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 22 | 22 |
| 22 | 43.94 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 15 |
| 23 | 43.95 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 28 | 44.10 | temperature | 30.0 | 90 | < th | dose independent | rect. | 18 | 2 |
| 29 | 44.16 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 14 | 16 |
| 31 | 44.19 | radiation | 1.0 | 720 | < th | dose independent | rect. | 15 | 5 |
| 40 | 44.30 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 41 | 44.34 | radiation | 1.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 43 | 44.34 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 1 | 19 |
| 53 | 44.54 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 10 | 10 |
| 88 | 45.07 | radiation | 1.0 | 720 | > th | dose independent | rect. | 13 | 18 |
| 95 | 45.18 | radiation | 1.0 | 720 | < th | dose independent | rect. | 10 | 10 |
| 108 | 45.26 | radiation | 1.0 | 720 | > th | dose independent | rect. | 10 | 22 |
| 125 | 45.43 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 15 |
| 151 | 45.62 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 161 | 45.71 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 177 | 45.79 | temperature | 15.0 | 90 | > th | dose independent | rect. | 20 | 23 |
| 179 | 45.81 | radiation | 1.0 | 720 | < th | dose independent | rect. | 22 | 22 |
| 187 | 45.88 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 19 | 1 |
| 216 | 46.17 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 226 | 46.23 | radiation | 1.0 | 720 | < th | dose dependent | no | NA | NA |
| 235 | 46.26 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 239 | 46.26 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 245 | 46.26 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 19 | 1 |
| 246 | 46.26 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 250 | 46.26 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 270 | 46.26 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 23 |
| 284 | 46.28 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 17 | 3 |
| 287 | 46.30 | radiation | 1.0 | 720 | < th | dose independent | rect. | 8 | 21 |
| 291 | 46.31 | radiation | 1.0 | 720 | < th | dose independent | rect. | 10 | 19 |
| 326 | 46.55 | radiation | 1.0 | 720 | < th | dose dependent | sin | 23 | NA |
| 327 | 46.55 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 3 |
| 338 | 46.67 | radiation | 1.0 | 720 | < th | dose independent | sin | 14 | NA |
| 339 | 46.67 | wind | 9.0 | 90 | < th | dose independent | rect. | 20 | 23 |
| 356 | 46.78 | wind | 1.0 | 90 | > th | dose independent | rect. | 19 | 1 |
| 357 | 46.78 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 1 |
| 358 | 46.78 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 1 |
| 364 | 46.78 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 19 | 1 |
| 366 | 46.78 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 1 |
| 381 | 46.80 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 20 | 23 |
| 383 | 46.80 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 20 | 23 |
| 396 | 46.91 | radiation | 1.0 | 720 | > th | dose independent | sin | 14 | NA |
| 398 | 46.92 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 5 |
| 416 | 47.03 | wind | 9.0 | 90 | < th | dose dependent | rect. | 19 | 1 |
| 423 | 47.08 | radiation | 1.0 | 720 | > th | dose independent | rect. | 12 | 7 |
| 456 | 47.22 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 3 |
| 497 | 47.39 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 10 | 10 |
| 499 | 47.40 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 512 | 47.47 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 561 | 47.73 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 5 | 12 |
| 564 | 47.74 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 578 | 47.79 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 21 |
| 611 | 47.85 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 1 |
| 612 | 47.85 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 1 |
| 613 | 47.85 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 20 | 21 |
| 670 | 47.94 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 15 |
| 688 | 48.03 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 718 | 48.14 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 830 | 48.34 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 5 | 13 |
| 863 | 48.44 | radiation | 1.0 | 720 | < th | dose independent | sin | 23 | NA |
| 881 | 48.47 | radiation | 1.0 | 720 | < th | dose independent | no | NA | NA |
| 893 | 48.50 | radiation | 1.0 | 720 | > th | dose independent | rect. | 5 | 14 |
| 912 | 48.52 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 20 | 23 |
| 919 | 48.54 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 923 | 48.55 | radiation | 1.0 | 720 | > th | dose independent | no | NA | NA |