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Os02g0717500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0175) R2 : 0.627
β1 : -0.834 (0.0641) R2dD : 0.144 R2D : 0.0508
β2 : 0.977 (0.0421) R2dC : 0.443 R2C : 0.408
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.388 (0.0373) R2dN8 : 0.118 R2N8 : 0.045
σ : 0.329
deviance : 49.37
__
_____
C
peak time of C : 22.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
42.34 0.306 10.8 -0.548 0.98 1.6 -0.0287 2.35 -0.284 22.5 19.55 4186 -- --
45.34 0.314 10.7 -0.35 1.06 0.868 -0.314 -- -0.22 22.3 22.2 5581 -- --
42.32 0.303 10.8 -0.549 0.977 1.6 -- 2.34 -0.291 22.5 19.4 4189 -- --
42.85 0.305 10.7 -0.121 0.988 0.762 -- -- -0.0925 22.5 56.02 37537 -- --
100.64 0.467 10.8 -0.522 -- 1.7 -- 2.56 -0.302 -- 19.36 4431 -- --
49.37 0.329 10.7 -0.835 0.977 -- -0.0298 -- -0.388 22.4 -- -- -- --
49.37 0.329 10.7 -0.834 0.977 -- -- -- -0.388 22.4 -- -- -- --
90.26 0.444 10.7 -0.617 -- 1.1 -- -- -0.238 -- 56.02 37537 -- --
43.05 0.306 10.7 -- 0.988 0.814 -- -- -0.044 22.4 198.2 38236 -- --
107.76 0.485 10.7 -0.818 -- -- -- -- -0.385 -- -- -- -- --
67.7 0.385 10.7 -- 0.972 -- -- -- -0.295 22.3 -- -- -- --
99.74 0.467 10.7 -- -- 1.3 -- -- -0.148 -- 56.02 37537 -- --
125.4 0.523 10.7 -- -- -- -- -- -0.294 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 39.96 humidity 50 43200 < th dose dependent rect. 14 1
3 40.03 wind 9 14400 > th dose dependent rect. 14 8
6 40.12 atmosphere 1010 14400 < th dose independent rect. 13 1
7 40.15 atmosphere 1010 14400 > th dose independent rect. 13 1
9 40.18 wind 9 14400 > th dose independent rect. 14 7
10 40.19 wind 9 14400 < th dose independent rect. 14 7
16 40.21 wind 7 14400 > th dose dependent rect. 15 4
28 40.31 wind 9 14400 > th dose dependent rect. 14 23
40 40.35 humidity 50 14400 < th dose dependent rect. 16 21
41 40.36 humidity 50 43200 < th dose independent rect. 13 2
47 40.37 humidity 80 14400 > th dose dependent rect. 4 1
48 40.37 wind 1 14400 < th dose dependent rect. 24 3
56 40.39 humidity 50 43200 < th dose dependent rect. 18 21
62 40.41 humidity 50 43200 < th dose independent rect. 19 21
63 40.41 humidity 50 43200 < th dose dependent rect. 3 12
77 40.42 humidity 50 43200 < th dose dependent rect. 5 10
83 40.43 humidity 50 43200 < th dose dependent rect. 8 7
89 40.44 humidity 50 43200 < th dose independent rect. 21 19
91 40.44 wind 7 14400 > th dose dependent rect. 12 9
93 40.45 humidity 50 43200 < th dose independent rect. 3 13
104 40.45 humidity 50 43200 < th dose dependent rect. 12 22
112 40.47 wind 1 14400 > th dose independent rect. 24 1
120 40.47 humidity 50 43200 < th dose dependent rect. 13 20
124 40.48 atmosphere 1010 14400 < th dose independent rect. 16 2
129 40.48 wind 9 14400 > th dose independent rect. 14 12
138 40.49 humidity 50 43200 > th dose independent rect. 12 1
143 40.49 humidity 50 14400 < th dose dependent rect. 12 6
166 40.50 radiation 10 43200 < th dose dependent rect. 6 1
172 40.51 wind 9 43200 < th dose independent rect. 15 1
176 40.51 wind 9 14400 > th dose dependent sin 16 NA
177 40.51 humidity 50 14400 < th dose dependent sin 16 NA
185 40.52 wind 1 14400 < th dose independent rect. 24 1
204 40.53 wind 9 14400 > th dose independent sin 16 NA
210 40.53 humidity 60 43200 < th dose independent rect. 23 11
211 40.53 humidity 50 43200 > th dose independent rect. 19 20
212 40.53 humidity 50 43200 < th dose independent rect. 12 20
240 40.55 humidity 70 43200 > th dose dependent rect. 6 1
247 40.56 wind 9 14400 < th dose independent sin 17 NA
253 40.56 wind 7 14400 > th dose independent rect. 11 10
255 40.56 humidity 50 43200 > th dose independent rect. 21 18
261 40.57 atmosphere 1010 14400 > th dose independent rect. 17 1
262 40.57 radiation 20 43200 < th dose independent rect. 15 2
280 40.57 humidity 50 43200 > th dose independent rect. 24 15
291 40.57 wind 1 14400 < th dose dependent rect. 21 13
302 40.58 humidity 50 43200 > th dose independent rect. 3 12
320 40.58 wind 1 14400 < th dose dependent rect. 22 15
357 40.60 humidity 50 43200 < th dose independent sin 5 NA
376 40.60 wind 9 14400 > th dose independent rect. 14 21
379 40.60 wind 9 14400 > th dose independent rect. 14 23
381 40.60 wind 5 14400 > th dose dependent rect. 17 1
392 40.61 radiation 40 43200 < th dose independent rect. 12 1
402 40.61 wind 9 14400 < th dose independent rect. 14 23
429 40.62 radiation 30 43200 < th dose independent rect. 10 7
477 40.62 wind 1 14400 < th dose dependent rect. 24 14
493 40.63 wind 7 14400 < th dose independent rect. 11 10
510 40.64 radiation 30 43200 < th dose independent sin 17 NA
516 40.64 atmosphere 1010 14400 < th dose independent rect. 8 10
530 40.64 humidity 50 14400 < th dose dependent no NA NA
653 40.65 radiation 20 43200 < th dose independent sin 14 NA
776 40.67 wind 7 14400 > th dose dependent rect. 6 15
795 40.68 humidity 50 43200 < th dose independent rect. 12 10
806 40.68 wind 9 14400 < th dose independent rect. 14 21
822 40.69 humidity 50 43200 > th dose independent sin 6 NA
824 40.69 atmosphere 1010 14400 < th dose independent sin 21 NA
848 40.69 atmosphere 1010 14400 > th dose independent rect. 8 11
859 40.69 atmosphere 1010 14400 < th dose independent rect. 7 15
973 40.71 wind 1 14400 < th dose dependent sin 8 NA