Os02g0715400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0715400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.07 | 0.37 | 12.9 | -0.837 | 1.16 | 1.54 | -0.747 | -1.67 | -0.639 | 20.5 | 20.29 | 11 | -- | -- |
| 64.55 | 0.374 | 12.9 | -0.556 | 1.14 | 1.42 | -0.595 | -- | -0.553 | 20.3 | 19.66 | 20 | -- | -- |
| 63.66 | 0.372 | 12.9 | -0.769 | 1.15 | 1.52 | -- | -1.39 | -0.627 | 20.5 | 20.31 | 18 | -- | -- |
| 65.51 | 0.377 | 12.9 | -0.53 | 1.14 | 1.44 | -- | -- | -0.557 | 20.4 | 19.9 | 19 | -- | -- |
| 98.63 | 0.463 | 12.9 | -1.31 | -- | 1.93 | -- | -3.3 | -0.771 | -- | 21.4 | 509 | -- | -- |
| 95.29 | 0.458 | 12.8 | -0.235 | 1.28 | -- | -0.602 | -- | -0.305 | 18.8 | -- | -- | -- | -- |
| 96.21 | 0.459 | 12.8 | -0.224 | 1.27 | -- | -- | -- | -0.307 | 18.8 | -- | -- | -- | -- |
| 105.33 | 0.478 | 12.8 | -0.675 | -- | 1.76 | -- | -- | -0.634 | -- | 19.6 | 508 | -- | -- |
| 72.2 | 0.398 | 12.8 | -- | 1.17 | 1.25 | -- | -- | -0.465 | 20.2 | 20.2 | 19 | -- | -- |
| 181 | 0.629 | 12.8 | -0.253 | -- | -- | -- | -- | -0.331 | -- | -- | -- | -- | -- |
| 97.54 | 0.462 | 12.8 | -- | 1.28 | -- | -- | -- | -0.282 | 18.8 | -- | -- | -- | -- |
| 115.93 | 0.501 | 12.8 | -- | -- | 1.55 | -- | -- | -0.523 | -- | 21.11 | 496 | -- | -- |
| 182.69 | 0.631 | 12.8 | -- | -- | -- | -- | -- | -0.303 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.94 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 3 | 58.89 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 14 | 60.13 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 22 |
| 22 | 61.18 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 35 | 61.95 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 40 | 62.13 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 42 | 62.16 | temperature | 20.0 | 10 | > th | dose dependent | no | NA | NA |
| 44 | 62.25 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 54 | 62.59 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 57 | 62.73 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 62 | 62.90 | temperature | 20.0 | 90 | > th | dose dependent | sin | 7 | NA |
| 83 | 63.50 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 91 | 63.61 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 98 | 63.79 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 103 | 63.87 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 106 | 63.93 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 110 | 64.06 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 116 | 64.09 | temperature | 30.0 | 30 | < th | dose dependent | no | NA | NA |
| 130 | 64.29 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 131 | 64.30 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 156 | 64.55 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 166 | 64.66 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 167 | 64.67 | temperature | 30.0 | 30 | < th | dose dependent | sin | 5 | NA |
| 171 | 64.73 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 184 | 64.81 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 187 | 64.88 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 203 | 65.07 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 224 | 65.21 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 253 | 65.46 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 263 | 65.53 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 279 | 65.73 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 374 | 66.52 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 378 | 66.56 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 380 | 66.58 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 395 | 66.71 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 396 | 66.71 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 421 | 66.88 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 442 | 66.97 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 448 | 67.01 | temperature | 25.0 | 90 | > th | dose independent | rect. | 6 | 22 |
| 499 | 67.42 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 511 | 67.54 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 529 | 67.64 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 537 | 67.67 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 552 | 67.74 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 598 | 67.90 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 615 | 67.99 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 15 |
| 619 | 68.02 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 17 | 18 |
| 643 | 68.16 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 647 | 68.19 | wind | 5.0 | 43200 | > th | dose independent | rect. | 15 | 7 |
| 664 | 68.26 | temperature | 25.0 | 90 | < th | dose independent | rect. | 23 | 23 |
| 705 | 68.40 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 711 | 68.41 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 712 | 68.42 | temperature | 25.0 | 90 | > th | dose independent | rect. | 22 | 23 |
| 722 | 68.46 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 723 | 68.47 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 737 | 68.55 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 739 | 68.56 | wind | 5.0 | 43200 | < th | dose independent | rect. | 16 | 6 |
| 754 | 68.61 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 776 | 68.69 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 801 | 68.77 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 802 | 68.77 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 14 | 7 |
| 806 | 68.77 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 814 | 68.80 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 829 | 68.84 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 857 | 68.93 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 921 | 69.12 | wind | 5.0 | 43200 | > th | dose independent | rect. | 11 | 11 |
| 927 | 69.14 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 940 | 69.17 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 977 | 69.27 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 22 |