Os02g0713400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Thioredoxin reductase 1 (EC 1.8.1.9) (NADPH-dependent thioredoxin reductase 1) (NTR 1).
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Os02g0713400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Thioredoxin reductase 1 (EC 1.8.1.9) (NADPH-dependent thioredoxin reductase 1) (NTR 1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.03 | 0.249 | 11.7 | 0.197 | 0.604 | -0.882 | -0.443 | 0.315 | 0.171 | 3.21 | 20.3 | 1594 | -- | -- |
| 28.08 | 0.247 | 11.7 | 0.213 | 0.603 | -0.989 | -0.449 | -- | 0.174 | 3.22 | 20.14 | 1596 | -- | -- |
| 28.42 | 0.248 | 11.7 | 0.198 | 0.581 | -0.697 | -- | 0.564 | 0.179 | 3.36 | 21.02 | 1222 | -- | -- |
| 28.57 | 0.249 | 11.7 | 0.227 | 0.584 | -0.92 | -- | -- | 0.174 | 3.33 | 20.69 | 1343 | -- | -- |
| 46.31 | 0.317 | 11.7 | 0.193 | -- | -0.872 | -- | 0.435 | 0.156 | -- | 21.41 | 1065 | -- | -- |
| 33.83 | 0.273 | 11.7 | 0.437 | 0.61 | -- | -0.438 | -- | 0.266 | 3.3 | -- | -- | -- | -- |
| 34.44 | 0.275 | 11.7 | 0.445 | 0.609 | -- | -- | -- | 0.268 | 3.33 | -- | -- | -- | -- |
| 46.42 | 0.317 | 11.7 | 0.215 | -- | -1 | -- | -- | 0.165 | -- | 21.31 | 1080 | -- | -- |
| 29.11 | 0.251 | 11.7 | -- | 0.568 | -0.855 | -- | -- | 0.131 | 3.42 | 20.29 | 2549 | -- | -- |
| 55.35 | 0.348 | 11.7 | 0.471 | -- | -- | -- | -- | 0.285 | -- | -- | -- | -- | -- |
| 39.66 | 0.295 | 11.7 | -- | 0.618 | -- | -- | -- | 0.219 | 3.33 | -- | -- | -- | -- |
| 47.16 | 0.32 | 11.7 | -- | -- | -0.968 | -- | -- | 0.125 | -- | 20.35 | 2517 | -- | -- |
| 61.2 | 0.365 | 11.7 | -- | -- | -- | -- | -- | 0.232 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.83 | radiation | 1 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 2 | 26.83 | radiation | 1 | 1440 | < th | dose dependent | rect. | 10 | 4 |
| 3 | 26.86 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 4 | 26.86 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 15 | 27.34 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 28 | 27.69 | radiation | 1 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 37 | 27.85 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 16 |
| 40 | 27.88 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 21 |
| 42 | 27.89 | radiation | 1 | 1440 | > th | dose independent | rect. | 12 | 3 |
| 60 | 27.95 | temperature | 20 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 89 | 28.02 | temperature | 20 | 1440 | < th | dose dependent | sin | 0 | NA |
| 107 | 28.05 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 20 |
| 143 | 28.10 | temperature | 20 | 1440 | < th | dose dependent | no | NA | NA |
| 187 | 28.16 | temperature | 20 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 198 | 28.18 | humidity | 50 | 14400 | > th | dose dependent | rect. | 3 | 4 |
| 215 | 28.21 | temperature | 20 | 1440 | < th | dose dependent | sin | 17 | NA |
| 252 | 28.26 | temperature | 20 | 720 | < th | dose independent | rect. | 10 | 20 |
| 378 | 28.46 | temperature | 20 | 720 | > th | dose independent | rect. | 18 | 23 |
| 393 | 28.49 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 23 |
| 399 | 28.50 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 22 |
| 425 | 28.53 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 430 | 28.53 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 23 |
| 465 | 28.56 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 23 |
| 475 | 28.57 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 499 | 28.60 | wind | 3 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 541 | 28.64 | radiation | 30 | 4320 | < th | dose independent | rect. | 17 | 14 |
| 547 | 28.64 | wind | 3 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 548 | 28.64 | temperature | 15 | 4320 | < th | dose dependent | rect. | 23 | 11 |
| 558 | 28.65 | temperature | 15 | 4320 | < th | dose dependent | rect. | 23 | 8 |
| 567 | 28.66 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 23 |
| 572 | 28.66 | humidity | 90 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 580 | 28.67 | wind | 3 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 592 | 28.68 | temperature | 15 | 1440 | > th | dose independent | rect. | 6 | 11 |
| 600 | 28.68 | humidity | 90 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 613 | 28.69 | wind | 5 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 617 | 28.69 | humidity | 90 | 43200 | < th | dose dependent | rect. | 22 | 9 |
| 621 | 28.70 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 645 | 28.71 | humidity | 90 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 660 | 28.72 | temperature | 20 | 720 | < th | dose independent | rect. | 14 | 23 |
| 677 | 28.73 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 23 |
| 680 | 28.73 | humidity | 90 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 682 | 28.73 | wind | 1 | 43200 | < th | dose dependent | rect. | 9 | 5 |
| 704 | 28.75 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 742 | 28.77 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 743 | 28.77 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 757 | 28.78 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 758 | 28.78 | wind | 1 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 776 | 28.78 | humidity | 80 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 781 | 28.79 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 3 |
| 815 | 28.81 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 13 |
| 819 | 28.81 | wind | 9 | 14400 | < th | dose independent | rect. | 18 | 20 |
| 821 | 28.81 | humidity | 80 | 43200 | < th | dose dependent | sin | 10 | NA |
| 835 | 28.82 | wind | 9 | 14400 | < th | dose independent | rect. | 22 | 22 |
| 848 | 28.83 | wind | 1 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 852 | 28.83 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 7 |
| 853 | 28.83 | wind | 3 | 43200 | > th | dose independent | rect. | 19 | 8 |
| 874 | 28.84 | temperature | 15 | 1440 | > th | dose independent | sin | 2 | NA |
| 876 | 28.84 | wind | 3 | 43200 | > th | dose independent | rect. | 23 | 4 |
| 877 | 28.84 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 13 |
| 889 | 28.84 | humidity | 50 | 43200 | > th | dose dependent | rect. | 21 | 9 |
| 898 | 28.85 | temperature | 20 | 1440 | < th | dose independent | sin | 2 | NA |
| 935 | 28.86 | humidity | 50 | 43200 | > th | dose dependent | rect. | 22 | 2 |
| 951 | 28.87 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 10 |
| 993 | 28.88 | wind | 1 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 998 | 28.88 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 14 |