Os02g0712500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF23 family protein.
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Os02g0712500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF23 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 585.81 | 1.14 | 5.7 | -3.79 | 1.41 | -3.62 | 0.82 | 2.35 | -0.335 | 4.71 | 49.01 | 4513 | -- | -- |
| 588.23 | 1.13 | 5.67 | -3.65 | 1.43 | -3.18 | 0.886 | -- | -0.374 | 4.69 | 49.82 | 4566 | -- | -- |
| 587.45 | 1.13 | 5.71 | -3.81 | 1.42 | -3.83 | -- | 2.56 | -0.34 | 4.7 | 49.03 | 4537 | -- | -- |
| 590.35 | 1.13 | 5.67 | -3.67 | 1.44 | -2.99 | -- | -- | -0.375 | 4.69 | 49.57 | 4536 | -- | -- |
| 692.47 | 1.23 | 5.74 | -3.87 | -- | -3.68 | -- | 3.09 | -0.273 | -- | 49.47 | 4452 | -- | -- |
| 684.16 | 1.23 | 5.72 | -2.79 | 1.46 | -- | 0.97 | -- | -0.595 | 4.47 | -- | -- | -- | -- |
| 686.69 | 1.23 | 5.72 | -2.8 | 1.47 | -- | -- | -- | -0.6 | 4.51 | -- | -- | -- | -- |
| 698.36 | 1.23 | 5.68 | -3.66 | -- | -2.85 | -- | -- | -0.326 | -- | 49.79 | 4483 | -- | -- |
| 628.32 | 1.17 | 5.59 | -- | 1.38 | -3.21 | -- | -- | -0.0675 | 5.34 | 56.19 | 29385 | -- | -- |
| 801.88 | 1.32 | 5.73 | -2.74 | -- | -- | -- | -- | -0.562 | -- | -- | -- | -- | -- |
| 892.69 | 1.4 | 5.65 | -- | 1.42 | -- | -- | -- | -0.289 | 4.56 | -- | -- | -- | -- |
| 733.88 | 1.26 | 5.6 | -- | -- | -3.31 | -- | -- | 0.031 | -- | 56.42 | 29934 | -- | -- |
| 999.73 | 1.48 | 5.66 | -- | -- | -- | -- | -- | -0.258 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 549.44 | wind | 9 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 2 | 550.15 | wind | 9 | 43200 | > th | dose dependent | rect. | 11 | 6 |
| 3 | 551.93 | wind | 9 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 4 | 552.02 | wind | 9 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 5 | 552.13 | wind | 9 | 43200 | > th | dose independent | rect. | 11 | 6 |
| 12 | 555.75 | wind | 9 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 14 | 556.54 | wind | 9 | 43200 | < th | dose independent | rect. | 11 | 6 |
| 22 | 558.89 | humidity | 80 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 26 | 559.81 | wind | 9 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 29 | 560.18 | humidity | 80 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 30 | 560.20 | humidity | 80 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 35 | 561.20 | radiation | 40 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 36 | 561.39 | radiation | 40 | 43200 | > th | dose independent | rect. | 13 | 19 |
| 54 | 561.57 | radiation | 20 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 58 | 562.49 | wind | 9 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 62 | 563.61 | radiation | 10 | 43200 | < th | dose dependent | rect. | 6 | 4 |
| 68 | 564.33 | radiation | 30 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 71 | 564.58 | radiation | 30 | 43200 | > th | dose independent | rect. | 11 | 5 |
| 90 | 564.93 | radiation | 40 | 43200 | > th | dose independent | sin | 14 | NA |
| 91 | 564.97 | radiation | 10 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 117 | 565.71 | radiation | 20 | 43200 | > th | dose independent | sin | 17 | NA |
| 257 | 567.26 | humidity | 90 | 14400 | < th | dose dependent | rect. | 2 | 2 |
| 260 | 567.48 | radiation | 30 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 349 | 568.52 | humidity | 80 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 384 | 568.74 | radiation | 20 | 43200 | > th | dose independent | rect. | 14 | 21 |
| 391 | 568.99 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 433 | 569.84 | radiation | 10 | 43200 | < th | dose dependent | rect. | 20 | 15 |
| 435 | 569.85 | radiation | 10 | 43200 | < th | dose dependent | rect. | 22 | 13 |
| 496 | 570.29 | radiation | 30 | 43200 | > th | dose independent | no | NA | NA |
| 705 | 570.51 | radiation | 20 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 717 | 570.78 | humidity | 80 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 754 | 571.25 | humidity | 80 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 818 | 571.97 | radiation | 20 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 825 | 572.18 | wind | 9 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 833 | 572.44 | humidity | 80 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 858 | 572.79 | radiation | 40 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 888 | 573.15 | radiation | 10 | 43200 | < th | dose dependent | sin | 6 | NA |
| 894 | 573.29 | radiation | 30 | 43200 | < th | dose dependent | rect. | 9 | 7 |