Os02g0711900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0711900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.39 | 0.456 | 7.42 | -0.712 | 2.37 | -2.16 | 0.3 | 3.17 | -0.00567 | 6.52 | 21.9 | 338 | -- | -- |
| 99.13 | 0.464 | 7.49 | -1.31 | 2.43 | -1.89 | -0.46 | -- | -0.18 | 6.33 | 21.65 | 390 | -- | -- |
| 94.57 | 0.453 | 7.42 | -0.742 | 2.36 | -2.16 | -- | 2.98 | -0.0159 | 6.51 | 21.96 | 337 | -- | -- |
| 99.65 | 0.465 | 7.49 | -1.31 | 2.43 | -1.87 | -- | -- | -0.18 | 6.35 | 21.59 | 389 | -- | -- |
| 257.38 | 0.747 | 7.41 | 0.103 | -- | -4.4 | -- | 7.37 | 0.172 | -- | 24.37 | 422 | -- | -- |
| 164.26 | 0.601 | 7.54 | -1.72 | 3.19 | -- | 0.0723 | -- | -0.497 | 6.19 | -- | -- | -- | -- |
| 164.28 | 0.6 | 7.54 | -1.72 | 3.19 | -- | -- | -- | -0.498 | 6.19 | -- | -- | -- | -- |
| 283.44 | 0.784 | 7.51 | -0.985 | -- | -3.75 | -- | -- | -0.0486 | -- | 24.2 | 413 | -- | -- |
| 138.01 | 0.547 | 7.43 | -- | 2.28 | -2.42 | -- | -- | 0.114 | 6.53 | 17.9 | 356 | -- | -- |
| 692.12 | 1.23 | 7.6 | -1.64 | -- | -- | -- | -- | -0.427 | -- | -- | -- | -- | -- |
| 242.56 | 0.729 | 7.5 | -- | 3.17 | -- | -- | -- | -0.306 | 6.22 | -- | -- | -- | -- |
| 307.91 | 0.817 | 7.48 | -- | -- | -3.91 | -- | -- | 0.09 | -- | 24.05 | 414 | -- | -- |
| 762.65 | 1.29 | 7.56 | -- | -- | -- | -- | -- | -0.246 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.19 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 22 |
| 15 | 91.35 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 12 |
| 18 | 91.59 | temperature | 10 | 270 | > th | dose dependent | sin | 21 | NA |
| 34 | 94.00 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 19 |
| 45 | 94.94 | temperature | 20 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 47 | 95.16 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 60 | 96.02 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 14 |
| 82 | 96.56 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 363 | 101.99 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 449 | 102.85 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 18 |
| 466 | 103.04 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 21 |
| 502 | 103.38 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 17 |
| 504 | 103.41 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 13 |
| 520 | 103.58 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 15 |
| 614 | 104.32 | temperature | 30 | 90 | < th | dose dependent | sin | 18 | NA |
| 629 | 104.52 | temperature | 30 | 270 | < th | dose dependent | sin | 20 | NA |