Os02g0711300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HSP20-like chaperone domain containing protein.
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Os02g0711300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : HSP20-like chaperone domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 127.16 | 0.53 | 3.91 | -0.309 | 1.59 | -1.56 | 0.357 | 1.24 | 0.109 | 19.5 | 1.9 | 725 | -- | -- |
| 128.75 | 0.528 | 3.92 | -0.317 | 1.58 | -1.56 | 0.597 | -- | 0.111 | 19.4 | 1.911 | 735 | -- | -- |
| 127.14 | 0.525 | 3.91 | -0.303 | 1.58 | -1.57 | -- | 1.65 | 0.112 | 19.5 | 1.92 | 736 | -- | -- |
| 131.09 | 0.533 | 3.91 | -0.35 | 1.5 | -1.43 | -- | -- | 0.0915 | 19.6 | 1.81 | 735 | -- | -- |
| 144.45 | 0.563 | 3.88 | -0.423 | -- | -0.447 | -- | -0.118 | 0.0447 | -- | 1.889 | 1663 | -- | -- |
| 135.71 | 0.546 | 3.9 | -0.421 | 0.714 | -- | 0.315 | -- | 0.0255 | 22.4 | -- | -- | -- | -- |
| 136.09 | 0.546 | 3.9 | -0.434 | 0.711 | -- | -- | -- | 0.0241 | 22.5 | -- | -- | -- | -- |
| 144.54 | 0.562 | 3.88 | -0.422 | -- | -0.448 | -- | -- | 0.0452 | -- | 1.889 | 1663 | -- | -- |
| 134.28 | 0.54 | 3.91 | -- | 1.69 | -1.71 | -- | -- | 0.145 | 19.4 | 1.801 | 738 | -- | -- |
| 167.13 | 0.604 | 3.88 | -0.422 | -- | -- | -- | -- | 0.0271 | -- | -- | -- | -- | -- |
| 141.06 | 0.556 | 3.89 | -- | 0.709 | -- | -- | -- | 0.0725 | 22.5 | -- | -- | -- | -- |
| 149.25 | 0.571 | 3.87 | -- | -- | -0.448 | -- | -- | 0.092 | -- | 1.889 | 1663 | -- | -- |
| 171.83 | 0.612 | 3.87 | -- | -- | -- | -- | -- | 0.0739 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.54 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 14 | 17 |
| 3 | 120.81 | wind | 1.0 | 10 | < th | dose independent | rect. | 14 | 4 |
| 7 | 120.96 | wind | 1.0 | 10 | < th | dose dependent | rect. | 14 | 4 |
| 14 | 121.33 | wind | 1.0 | 90 | < th | dose dependent | rect. | 13 | 5 |
| 18 | 121.37 | wind | 1.0 | 10 | < th | dose independent | rect. | 14 | 2 |
| 20 | 121.37 | wind | 1.0 | 10 | < th | dose dependent | rect. | 14 | 2 |
| 22 | 121.39 | wind | 1.0 | 90 | < th | dose dependent | rect. | 13 | 1 |
| 29 | 121.48 | wind | 1.0 | 90 | < th | dose independent | rect. | 12 | 6 |
| 32 | 121.49 | wind | 1.0 | 90 | < th | dose independent | rect. | 13 | 1 |
| 46 | 121.62 | wind | 1.0 | 30 | < th | dose dependent | sin | 21 | NA |
| 61 | 121.77 | wind | 1.0 | 10 | < th | dose dependent | rect. | 6 | 9 |
| 98 | 122.23 | wind | 1.0 | 30 | > th | dose independent | sin | 21 | NA |
| 105 | 122.28 | temperature | 25.0 | 720 | < th | dose independent | rect. | 13 | 9 |
| 144 | 122.62 | wind | 1.0 | 30 | < th | dose independent | sin | 21 | NA |
| 168 | 122.77 | temperature | 25.0 | 270 | < th | dose independent | rect. | 14 | 17 |
| 186 | 122.84 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 193 | 122.88 | wind | 1.0 | 30 | < th | dose dependent | rect. | 10 | 8 |
| 247 | 123.22 | temperature | 20.0 | 90 | > th | dose independent | rect. | 10 | 17 |
| 260 | 123.25 | temperature | 25.0 | 720 | > th | dose independent | rect. | 14 | 6 |
| 273 | 123.30 | wind | 1.0 | 10 | < th | dose independent | rect. | 6 | 9 |
| 301 | 123.45 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 12 | 11 |
| 314 | 123.56 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 351 | 123.76 | temperature | 20.0 | 10 | > th | dose independent | rect. | 10 | 17 |
| 353 | 123.78 | temperature | 25.0 | 720 | < th | dose independent | sin | 18 | NA |
| 357 | 123.80 | wind | 1.0 | 30 | < th | dose independent | rect. | 10 | 5 |
| 471 | 124.33 | radiation | 1.0 | 720 | < th | dose independent | rect. | 6 | 18 |
| 494 | 124.42 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 23 | 22 |
| 495 | 124.42 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 23 | 22 |
| 522 | 124.51 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 13 | 19 |
| 536 | 124.57 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 566 | 124.70 | radiation | 30.0 | 720 | < th | dose dependent | rect. | 16 | 8 |
| 633 | 124.91 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 7 | 17 |
| 663 | 125.04 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 24 | 16 |
| 666 | 125.04 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 24 | 16 |
| 674 | 125.07 | temperature | 30.0 | 720 | < th | dose dependent | sin | 18 | NA |
| 679 | 125.10 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 9 | 12 |
| 696 | 125.17 | radiation | 1.0 | 720 | > th | dose independent | rect. | 17 | 19 |
| 711 | 125.21 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 12 | 20 |
| 766 | 125.33 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 24 | 19 |
| 769 | 125.33 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 24 | 19 |
| 778 | 125.35 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 21 |
| 785 | 125.35 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 21 |
| 787 | 125.36 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 6 |
| 806 | 125.39 | temperature | 25.0 | 720 | > th | dose independent | sin | 19 | NA |
| 808 | 125.40 | precipitation | 0.1 | 720 | < th | dose independent | sin | 3 | NA |
| 809 | 125.40 | precipitation | 0.1 | 720 | < th | dose dependent | sin | 3 | NA |
| 813 | 125.41 | radiation | 1.0 | 720 | > th | dose independent | rect. | 15 | 21 |
| 816 | 125.41 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 24 | 18 |
| 819 | 125.42 | radiation | 20.0 | 720 | < th | dose independent | rect. | 15 | 9 |
| 835 | 125.44 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 14 | 19 |
| 840 | 125.45 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 24 | 18 |
| 912 | 125.57 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 3 | 15 |
| 969 | 125.71 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 10 |