Os02g0711000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0711000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.16 | 0.206 | 9.76 | -0.877 | 0.685 | -0.543 | -0.177 | 0.0822 | -0.132 | 3.58 | 23.84 | 57 | -- | -- |
| 19.17 | 0.204 | 9.76 | -0.883 | 0.688 | -0.536 | -0.188 | -- | -0.134 | 3.57 | 23.87 | 57 | -- | -- |
| 19.22 | 0.204 | 9.75 | -0.842 | 0.692 | -0.54 | -- | 0.273 | -0.117 | 3.6 | 23.3 | 57 | -- | -- |
| 19.28 | 0.204 | 9.76 | -0.887 | 0.691 | -0.523 | -- | -- | -0.135 | 3.59 | 23.76 | 57 | -- | -- |
| 35.84 | 0.279 | 9.72 | -0.625 | -- | -1.12 | -- | 1.04 | -0.00254 | -- | 24.1 | 120 | -- | -- |
| 23.72 | 0.228 | 9.77 | -0.983 | 0.906 | -- | -0.00302 | -- | -0.202 | 3.53 | -- | -- | -- | -- |
| 23.72 | 0.228 | 9.77 | -0.982 | 0.906 | -- | -- | -- | -0.202 | 3.53 | -- | -- | -- | -- |
| 35.85 | 0.279 | 9.75 | -0.764 | -- | -1.13 | -- | -- | -0.0552 | -- | 24.1 | 66 | -- | -- |
| 38.19 | 0.288 | 9.73 | -- | 0.586 | -0.797 | -- | -- | 0.0198 | 3.8 | 21.38 | 57 | -- | -- |
| 69.56 | 0.39 | 9.78 | -0.944 | -- | -- | -- | -- | -0.178 | -- | -- | -- | -- | -- |
| 49.16 | 0.328 | 9.75 | -- | 0.887 | -- | -- | -- | -0.093 | 3.53 | -- | -- | -- | -- |
| 50.64 | 0.331 | 9.72 | -- | -- | -1.25 | -- | -- | 0.0668 | -- | 23.33 | 73 | -- | -- |
| 93.09 | 0.45 | 9.75 | -- | -- | -- | -- | -- | -0.0736 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.74 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 19 |
| 11 | 18.25 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 17 |
| 35 | 18.67 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 36 | 18.69 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 18 |
| 47 | 18.79 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 11 |
| 51 | 18.82 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 52 | 18.83 | temperature | 10.0 | 90 | > th | dose dependent | sin | 1 | NA |
| 53 | 18.83 | temperature | 30.0 | 90 | < th | dose dependent | sin | 1 | NA |
| 61 | 18.87 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 6 | 23 |
| 71 | 18.92 | temperature | 20.0 | 90 | > th | dose dependent | sin | 1 | NA |
| 90 | 18.98 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 7 | 13 |
| 92 | 18.98 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 7 | 18 |
| 123 | 19.06 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 24 | 20 |
| 126 | 19.07 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 4 | 16 |
| 165 | 19.13 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 18 | 23 |
| 168 | 19.14 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 7 | 18 |
| 192 | 19.19 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 5 |
| 195 | 19.19 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 5 |
| 211 | 19.22 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 5 |
| 219 | 19.22 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 4 | 21 |
| 274 | 19.27 | temperature | 25.0 | 30 | > th | dose dependent | no | NA | NA |
| 305 | 19.29 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 307 | 19.29 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 310 | 19.29 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 14 |
| 347 | 19.32 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 23 | 18 |
| 354 | 19.33 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 365 | 19.34 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 382 | 19.35 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 22 |
| 489 | 19.43 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 490 | 19.43 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 19 | 16 |
| 513 | 19.44 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 2 |
| 514 | 19.44 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 520 | 19.44 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 2 |
| 529 | 19.45 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 530 | 19.45 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 4 |
| 581 | 19.46 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 584 | 19.47 | wind | 9.0 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 595 | 19.48 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 599 | 19.48 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 2 |
| 608 | 19.48 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 641 | 19.50 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 12 |
| 655 | 19.51 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 6 |
| 679 | 19.52 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 19 | 10 |
| 712 | 19.54 | wind | 9.0 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 732 | 19.55 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 19 | 2 |
| 755 | 19.57 | wind | 9.0 | 14400 | < th | dose independent | rect. | 19 | 9 |
| 775 | 19.58 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 19 | 6 |
| 818 | 19.62 | wind | 9.0 | 14400 | > th | dose independent | rect. | 19 | 6 |
| 842 | 19.63 | wind | 9.0 | 14400 | > th | dose independent | rect. | 19 | 9 |
| 844 | 19.63 | wind | 9.0 | 14400 | > th | dose independent | rect. | 19 | 16 |
| 873 | 19.64 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 928 | 19.68 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 953 | 19.70 | wind | 9.0 | 14400 | < th | dose independent | rect. | 19 | 6 |
| 954 | 19.70 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 13 |
| 995 | 19.73 | wind | 9.0 | 14400 | < th | dose independent | rect. | 19 | 16 |