Os02g0708300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0708300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12.12 | 0.164 | 12.7 | 0.507 | 0.098 | -0.611 | -0.39 | -0.612 | 0.206 | 22.3 | 21.27 | 114 | -- | -- |
| 12.33 | 0.164 | 12.7 | 0.621 | 0.111 | -0.667 | -0.317 | -- | 0.239 | 21.3 | 21.6 | 123 | -- | -- |
| 12.61 | 0.165 | 12.7 | 0.541 | 0.119 | -0.649 | -- | -0.492 | 0.217 | 21 | 21.33 | 137 | -- | -- |
| 12.65 | 0.166 | 12.7 | 0.636 | 0.122 | -0.677 | -- | -- | 0.239 | 20.7 | 21.6 | 138 | -- | -- |
| 13.22 | 0.169 | 12.7 | 0.584 | -- | -0.655 | -- | -0.303 | 0.229 | -- | 21.29 | 94 | -- | -- |
| 20.48 | 0.212 | 12.7 | 0.487 | 0.264 | -- | -0.0936 | -- | 0.131 | 1.88 | -- | -- | -- | -- |
| 20.51 | 0.212 | 12.7 | 0.49 | 0.264 | -- | -- | -- | 0.131 | 1.97 | -- | -- | -- | -- |
| 13.29 | 0.17 | 12.7 | 0.636 | -- | -0.675 | -- | -- | 0.244 | -- | 21.41 | 94 | -- | -- |
| 22.55 | 0.221 | 12.7 | -- | 0.166 | -0.487 | -- | -- | 0.136 | 22.7 | 22.78 | 233 | -- | -- |
| 24.72 | 0.232 | 12.7 | 0.501 | -- | -- | -- | -- | 0.138 | -- | -- | -- | -- | -- |
| 26.84 | 0.242 | 12.8 | -- | 0.274 | -- | -- | -- | 0.0768 | 2.02 | -- | -- | -- | -- |
| 23.23 | 0.225 | 12.7 | -- | -- | -0.562 | -- | -- | 0.143 | -- | 23.54 | 41 | -- | -- |
| 31.34 | 0.261 | 12.7 | -- | -- | -- | -- | -- | 0.082 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 11.54 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 22 |
| 7 | 11.83 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 16 | 12.07 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 21 | 12.13 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 22 | 12.18 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 27 | 12.25 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 69 | 12.50 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 100 | 12.69 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 122 | 12.75 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 125 | 12.77 | temperature | 10 | 270 | > th | dose dependent | sin | 2 | NA |
| 192 | 12.92 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 197 | 12.93 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 268 | 13.09 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 322 | 13.17 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 350 | 13.19 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 408 | 13.25 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 12 |
| 424 | 13.25 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 681 | 13.39 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 19 |
| 797 | 13.45 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 18 |
| 831 | 13.47 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 4 |
| 872 | 13.49 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 876 | 13.49 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 13 |
| 908 | 13.50 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 938 | 13.51 | temperature | 30 | 270 | < th | dose dependent | sin | 0 | NA |
| 973 | 13.52 | temperature | 10 | 1440 | > th | dose dependent | sin | 4 | NA |
| 976 | 13.52 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |