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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0706900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Esterase/lipase/thioesterase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.3 (0.0617) R2 : 0.35
β1 : 0.0663 (0.308) R2dD : 0.000133 R2D : 0.00542
β2 : -- (--) R2dC : -- R2C : --
β3 : 0.806 (0.166) R2dE : 0.0397 R2E : -0.0391
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 5.92 (0.611) R2dD*E : 0.296 R2D*E : 0.266
γ1 : 0.732 (0.137) R2dN8 : 0.071 R2N8 : 0.0598
σ : 1.06
deviance : 513.49
__
_____
C
peak time of C : --
E
wheather : atmosphere
threshold : 1010
memory length : 18959
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
500.27 1.05 4.31 0.0337 0.465 0.821 0.0643 5.96 0.727 1.54 1010 18963 -- --
604.7 1.15 4.07 2.12 0.418 0.985 -0.225 -- 1.27 2.1 1007 12301 -- --
500.27 1.04 4.31 0.027 0.466 0.823 -- 5.99 0.726 1.55 1010 18980 -- --
601.67 1.14 4.09 2.23 0.459 0.992 -- -- 1.24 1.5 1014 11341 -- --
513.49 1.06 4.3 0.0663 -- 0.806 -- 5.92 0.732 -- 1010 18959 -- --
636.82 1.18 4.12 1.82 0.41 -- -0.0782 -- 1.02 1.56 -- -- -- --
636.83 1.18 4.12 1.82 0.409 -- -- -- 1.02 1.47 -- -- -- --
612.38 1.15 4.06 2.3 -- 0.995 -- -- 1.27 -- 1013 11295 -- --
716.2 1.25 4.14 -- 0.457 0.52 -- -- 0.933 1.72 1007 15620 -- --
647.12 1.19 4.12 1.84 -- -- -- -- 1.02 -- -- -- -- --
724.26 1.26 4.17 -- 0.442 -- -- -- 0.813 1.61 -- -- -- --
726 1.26 4.2 -- -- 0.807 -- -- 0.672 -- 1003 12140 -- --
736.19 1.27 4.17 -- -- -- -- -- 0.821 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 473.86 wind 1 43200 > th dose independent rect. 10 3
2 474.92 wind 1 43200 < th dose independent rect. 10 3
7 485.27 wind 1 43200 < th dose independent rect. 21 2
10 488.03 temperature 30 43200 > th dose dependent rect. 12 1
12 488.23 temperature 25 43200 > th dose independent rect. 21 1
14 488.58 temperature 25 43200 < th dose independent rect. 21 1
17 489.12 temperature 30 43200 > th dose dependent rect. 8 7
37 489.34 wind 1 43200 < th dose dependent rect. 21 3
38 489.39 temperature 25 43200 > th dose dependent rect. 19 2
70 489.49 temperature 30 43200 < th dose independent rect. 15 20
72 489.50 temperature 30 43200 > th dose independent rect. 14 21
79 489.59 wind 1 43200 < th dose dependent rect. 16 9
81 489.63 wind 1 43200 < th dose dependent rect. 19 5
83 489.67 temperature 30 43200 > th dose dependent sin 5 NA
127 490.26 temperature 30 43200 > th dose dependent rect. 12 23
128 490.29 wind 1 43200 > th dose independent rect. 21 4
150 490.38 temperature 30 43200 > th dose dependent no NA NA
244 490.42 temperature 30 43200 > th dose dependent rect. 10 23
334 490.73 temperature 30 43200 < th dose independent sin 11 NA
343 490.89 temperature 30 43200 > th dose independent sin 11 NA
370 491.28 wind 1 43200 < th dose independent rect. 21 4
382 491.50 temperature 30 43200 > th dose independent rect. 15 2
384 491.54 temperature 30 43200 < th dose independent rect. 15 3
400 491.58 temperature 30 43200 < th dose independent rect. 17 16
409 491.69 temperature 30 43200 > th dose independent rect. 8 9
453 491.74 wind 1 43200 < th dose dependent rect. 10 1
466 491.94 wind 1 43200 < th dose dependent rect. 18 7
467 491.95 temperature 30 43200 > th dose independent no NA NA
468 491.95 wind 1 43200 > th dose independent rect. 21 2
561 491.97 temperature 30 43200 > th dose independent sin 3 NA
579 492.06 temperature 30 43200 < th dose independent rect. 5 13
580 492.06 temperature 30 43200 < th dose independent rect. 3 15
582 492.07 temperature 30 43200 < th dose independent rect. 8 10
596 492.11 temperature 25 43200 < th dose independent rect. 6 1
605 492.16 temperature 30 43200 < th dose independent rect. 17 1
643 492.24 temperature 30 43200 > th dose independent rect. 10 23
650 492.25 temperature 30 43200 < th dose independent rect. 15 8
652 492.25 temperature 30 43200 < th dose independent rect. 15 11
657 492.25 temperature 30 43200 < th dose independent rect. 8 15
658 492.25 temperature 30 43200 < th dose independent rect. 15 15
677 492.25 temperature 30 43200 < th dose independent rect. 1 22
682 492.25 radiation 10 14400 < th dose dependent rect. 10 2
684 492.26 temperature 30 43200 < th dose independent no NA NA
692 492.26 temperature 30 43200 < th dose independent rect. 15 13
769 492.31 temperature 30 43200 < th dose independent rect. 17 23
793 492.40 temperature 25 43200 > th dose independent rect. 6 1
794 492.41 temperature 25 43200 > th dose dependent rect. 18 13
796 492.42 temperature 30 43200 < th dose independent sin 2 NA
802 492.44 wind 1 43200 < th dose independent rect. 18 7
860 492.56 wind 1 43200 > th dose independent rect. 19 6
862 492.57 temperature 30 43200 < th dose independent rect. 10 23
955 492.80 wind 1 43200 < th dose independent rect. 19 4
979 492.90 temperature 30 43200 < th dose independent rect. 10 1