BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0706900 Os02g0706900|J100065H17
(261 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G36610.1 | chr4:17265545-17267274 REVERSE LENGTH=318 223 1e-58
AT2G18360.1 | chr2:7976848-7979221 REVERSE LENGTH=314 220 5e-58
AT4G39955.1 | chr4:18530573-18532088 FORWARD LENGTH=329 98 6e-21
AT1G78210.1 | chr1:29422820-29424294 REVERSE LENGTH=315 94 9e-20
AT1G17430.1 | chr1:5982310-5983919 FORWARD LENGTH=333 93 1e-19
AT1G72620.1 | chr1:27341079-27342401 FORWARD LENGTH=336 90 1e-18
AT5G09430.1 | chr5:2932162-2933362 FORWARD LENGTH=312 89 2e-18
AT5G21950.1 | chr5:7254067-7255866 REVERSE LENGTH=309 84 9e-17
AT4G33180.1 | chr4:16000282-16002055 FORWARD LENGTH=308 80 2e-15
>AT4G36610.1 | chr4:17265545-17267274 REVERSE LENGTH=318
Length = 317
Score = 223 bits (567), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/237 (47%), Positives = 149/237 (62%), Gaps = 19/237 (8%)
Query: 1 MVNFVEAQKPLLKRLMRMAGLRPVDVEIEPGTTMHIWVPKHHVSKKTGTIRPXXXXXXXX 60
MVNFVE QKPLL LM+MAG+ P +EIEPGT ++ WVPK + K +GT +P
Sbjct: 1 MVNFVEVQKPLLYGLMKMAGVVPYTLEIEPGTKINFWVPKETLKKNSGTGKPTKPDKPKK 60
Query: 61 XXXXXXXXXXXXXXXXXXXPNVVLVHGFAAEGIVTWQFNFGVLVSRYNLYIPDLLFFGKS 120
V+L+HGFA EGIVTWQF G L +Y++YIPDLLFFG S
Sbjct: 61 PV-------------------VLLIHGFAGEGIVTWQFQVGALSKKYSVYIPDLLFFGGS 101
Query: 121 ATASADRSPELQXXXXXXXXXXXXXXXXDVVGFSYGGMVAFKLAETRPDLVRSLAVSGSV 180
T ++DRSP Q VGFSYGGMVAFK+AE PD+VR++ VSGS+
Sbjct: 102 YTDNSDRSPAFQADCLVKGLRILGVDKFVPVGFSYGGMVAFKIAEAYPDMVRAIVVSGSI 161
Query: 181 VAMTDAVNSATMTRLGATSSAELLMPETLKGLKQLLSISMYKKMWFPDRFYKDYLKV 237
MTD +N A++ RLG +SS +LL+P ++ GLK L +I+++K +WFP R +KDY++V
Sbjct: 162 PTMTDTINEASLNRLGFSSSTDLLLPTSVTGLKALFTIAVHKPLWFPKRLFKDYIEV 218
>AT2G18360.1 | chr2:7976848-7979221 REVERSE LENGTH=314
Length = 313
Score = 220 bits (561), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 108/245 (44%), Positives = 154/245 (62%), Gaps = 27/245 (11%)
Query: 1 MVNFVEAQKPLLKRLMRMAGLRPVDVEIEPGTTMHIWVPKHHVSK-----KTGTIRPXXX 55
MVNFV+ QKPLL RLM++AG+ P VE+EPGT M+ W+PK + K K + P
Sbjct: 1 MVNFVDLQKPLLYRLMKLAGVIPYTVELEPGTKMNFWIPKETLKKTKKSDKNFAVEPQKP 60
Query: 56 XXXXXXXXXXXXXXXXXXXXXXXXPNVVLVHGFAAEGIVTWQFNFGVLVSRYNLYIPDLL 115
P ++ +HGFAAEGIVTWQF G L +Y++YIPDLL
Sbjct: 61 TK----------------------PVLLFIHGFAAEGIVTWQFQVGSLAKKYSVYIPDLL 98
Query: 116 FFGKSATASADRSPELQXXXXXXXXXXXXXXXXDVVGFSYGGMVAFKLAETRPDLVRSLA 175
FFG S + +ADRSP Q +VGFSYGGMVAFK+AE P++V+++
Sbjct: 99 FFGGSYSDNADRSPAFQAHCLVKSLRILGIEKFTLVGFSYGGMVAFKIAEEYPEMVQAMV 158
Query: 176 VSGSVVAMTDAVNSATMTRLGATSSAELLMPETLKGLKQLLSISMYKKMWFPDRFYKDYL 235
VSGS++AMTD ++ + + +LG SSA+LL+P ++KGLK L +++++K MWFP R +KD++
Sbjct: 159 VSGSILAMTDTISESNLNQLGFKSSADLLLPTSVKGLKTLFTLAVHKPMWFPKRLFKDFI 218
Query: 236 KVNLS 240
+V ++
Sbjct: 219 EVMIT 223
>AT4G39955.1 | chr4:18530573-18532088 FORWARD LENGTH=329
Length = 328
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 100/237 (42%), Gaps = 35/237 (14%)
Query: 3 NFVEAQKPLLKRLMRMAGLRPVDVEIEPGTTMHIWVPKHHVSKKTGTIRPXXXXXXXXXX 62
++V ++ + AGLR ++ GT H W+P H+ K
Sbjct: 6 SYVSSRNKCYQYSFSRAGLRSSTSDLGDGTVFHCWIPLTHIHTK---------------- 49
Query: 63 XXXXXXXXXXXXXXXXXPNVVLVHGFAAEGIVTWQFNFGVLVSRYNLYIPDLLFFGKSAT 122
P ++L+HG A + W + R+N+Y+PDL+FFG S T
Sbjct: 50 -----------------PTLLLLHGIGANAMWQWDRFIDRFIPRFNVYVPDLIFFGDSYT 92
Query: 123 ASADRSPELQXXXXXXXXXXXXXXXXDVVGFSYGGMVAFKLAETRPDLVRSLAVSGSVVA 182
DRS Q V G SYGG VA+ LA + V + + + VA
Sbjct: 93 TRPDRSESFQATCVMKAMDAYGVRTMTVAGLSYGGFVAYSLAAQFKERVDRVVLICAGVA 152
Query: 183 MTDAVNSATMTRLGA-TSSAELLMPETLKGLKQLLSISMYK-KMWFPDRFYKDYLKV 237
+ + + M ++ + +A +L P++ L++LL +S YK +W P F DY+ V
Sbjct: 153 LEEKDSEDGMFKVKSPEEAAAVLFPQSPSMLRRLLQLSFYKPPIWIPSCFAMDYIHV 209
>AT1G78210.1 | chr1:29422820-29424294 REVERSE LENGTH=315
Length = 314
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 99/219 (45%), Gaps = 34/219 (15%)
Query: 6 EAQKPLLKRLMRMAGLRPVDVEIEPGTTMHIWVPKHHVSKKTGTIRPXXXXXXXXXXXXX 65
EA + K + +GLRPV ++++ GT ++ WV K K
Sbjct: 9 EALERTYKSGFKRSGLRPVTIDLKDGTVVNFWVSKTKPESKP------------------ 50
Query: 66 XXXXXXXXXXXXXXPNVVLVHGFAAEGIVTWQFNFGVLVSRY-NLYIPDLLFFGKSATAS 124
PN++L+HG A I W ++ +SRY NLYIPDL+FFG S+T
Sbjct: 51 -------------KPNLLLIHGLGATAIWQW-YDVARRLSRYFNLYIPDLVFFGGSSTTR 96
Query: 125 ADRSPELQXXXXXXXXXXXXXXXXDVVGFSYGGMVAFKLAETRPDLVRSLAVSGSVVAMT 184
+RS Q +VG SYGG V +++A D V + + + V +
Sbjct: 97 PERSDIFQAQTLMRALEAQSVKKFSLVGLSYGGFVGYRMASMYADAVEKVVICCAAVCVE 156
Query: 185 DAVNSATMTRLGATSSA-ELLMPETLKGLKQLLSISMYK 222
+ A + ++ A ++L+PE++K L++L+ YK
Sbjct: 157 EKDMKAGVFKVSDLDEASKILVPESVKKLRELMGYIFYK 195
>AT1G17430.1 | chr1:5982310-5983919 FORWARD LENGTH=333
Length = 332
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 104/231 (45%), Gaps = 49/231 (21%)
Query: 19 AGLRPVDVEIEPG-TTMHIWVPKHH-VSKKTGTIRPXXXXXXXXXXXXXXXXXXXXXXXX 76
LRPV V+++ G TT+H W+ H +S++
Sbjct: 50 CDLRPVTVDLDDGETTVHFWISGHRRISRQ------------------------------ 79
Query: 77 XXXPNVVLVHGFAAEGIVTWQFNFGV--LVSRYNLYIPDLLFFGKSATASADRSPELQXX 134
N+V++HG+ G WQF V L +NL+IPDL+FFGKS + + DRS E+Q
Sbjct: 80 ----NLVMLHGYG--GNSKWQFVHQVSDLSKSFNLFIPDLVFFGKSYSKNRDRSVEIQAR 133
Query: 135 XXXXXXXXXXXXX----XDVVGFSYGGMVAFKLAETRPDLVRSLAVSGSVVAMTDAVNSA 190
+ SYGG VA+K+AE P +V L + S V T +A
Sbjct: 134 SVVGGLKKLGCVEGGGGISIYSISYGGFVAYKMAEIWPAMVEKLVIVSSGVGFTQQQKTA 193
Query: 191 TMTRLGATSSAELLMPETLKGLKQLLSISMYKKM----WFPDRFYKDYLKV 237
+ + G S ++L+P+T L+ L+ ISM + W PD F ++ V
Sbjct: 194 ELKKHGGDCS-KILVPKTPMDLRLLIKISMNTGLTFVDWVPDFFLSQFIAV 243
>AT1G72620.1 | chr1:27341079-27342401 FORWARD LENGTH=336
Length = 335
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 98/228 (42%), Gaps = 45/228 (19%)
Query: 19 AGLRPVDVEIEPG-TTMHIWVPKHHVSKKTGTIRPXXXXXXXXXXXXXXXXXXXXXXXXX 77
LRP+ V++ G TT+H W+ H +
Sbjct: 54 CDLRPITVDLNDGETTLHFWISGHRKINR------------------------------- 82
Query: 78 XXPNVVLVHGFAAEGIVTWQFNFGV--LVSRYNLYIPDLLFFGKSATASADRSPELQXXX 135
PN+V++HG+ G WQF V L +NL+IPDL+FFGKS + + DR+ E Q
Sbjct: 83 --PNLVMLHGYG--GNSKWQFIHQVSDLSKSFNLFIPDLVFFGKSYSRNTDRTIEFQARS 138
Query: 136 XXXXXXXXXXXXXD--VVGFSYGGMVAFKLAETRPDLVRSLAVSGSVVAMTDAVNSATMT 193
D V SYGG VA+++A+ P+++ L + S V T M
Sbjct: 139 IVGGLKRLGCGDGDLSVYSISYGGFVAYRIAKIWPEMIEKLVIVSSGVGFTQQQKMTEMK 198
Query: 194 RLGATSSAELLMPETLKGLKQLLSISMYKKM----WFPDRFYKDYLKV 237
+ G S E+L+P + L+ L+ +SM + W PD ++ V
Sbjct: 199 KHGGDVS-EILVPSNPRDLRLLVKVSMNTGIRFLDWVPDFILSQFIAV 245
>AT5G09430.1 | chr5:2932162-2933362 FORWARD LENGTH=312
Length = 311
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 103/242 (42%), Gaps = 40/242 (16%)
Query: 3 NFVEAQKPLLKRLMRMAGLRPVDVEIEPG-----TTMHIWVPKHHVSKKTGTIRPXXXXX 57
+F ++ L ++ AGLR V ++ G T MH W+PK K
Sbjct: 12 SFTASRDWLFRQSFANAGLRSVTTDLSHGNSIASTAMHCWIPKSPNRSK----------- 60
Query: 58 XXXXXXXXXXXXXXXXXXXXXXPNVVLVHGFAAEGIVTWQFNFGVLVSRYNLYIPDLLFF 117
PN++L+HGF A + + + R+N+Y+PDLLFF
Sbjct: 61 ----------------------PNLLLLHGFGANAMWQYGEHLRAFTGRFNVYVPDLLFF 98
Query: 118 GKSATASADRSPELQXXXXXXXXXXXXXXXXDVVGFSYGGMVAFKLAETRPDLVRSLAVS 177
G S+T+ +R+ Q ++VG SYGG V + LA P+ V L +
Sbjct: 99 GLSSTSEPNRTESFQARCLMRLMEAHGVQRMNIVGISYGGFVGYSLAAQFPENVEKLVLC 158
Query: 178 GSVVAMTDAVNSATMTRLGATSSAE-LLMPETLKGLKQLLSISMYKKM-WFPDRFYKDYL 235
+ V + + + ++ A +L+P+T + LK+L+ S K + P F D++
Sbjct: 159 CAGVCLEEKDMEDGLFKVPNLEEATGILIPQTPEKLKELIRFSFVKPIKGVPSFFLWDFI 218
Query: 236 KV 237
V
Sbjct: 219 DV 220
>AT5G21950.1 | chr5:7254067-7255866 REVERSE LENGTH=309
Length = 308
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 33/237 (13%)
Query: 1 MVNFVEAQKPLLKRLMRMAGLRPVDVEIEPGTTMHIWVPKHHVSKKTGTIRPXXXXXXXX 60
+ FVEA LL+R AGL + I+ TT+ W P S +
Sbjct: 8 VARFVEA---LLRRRFSSAGLSLQTLSIDSETTIQFWGPPPSSSSEN------------- 51
Query: 61 XXXXXXXXXXXXXXXXXXXPNVVLVHGFAAEGIVTWQFNFGVLVSRYNLYIPDLLFFGKS 120
P+++L+HGF + W L + LY+PDL+FFG S
Sbjct: 52 ----------------TQKPSLLLLHGFGPSAVWQWSHQVKPLSHFFRLYVPDLVFFGGS 95
Query: 121 ATASADRSPELQXXXXXXXXXXXXXXXXDVVGFSYGGMVAFKLAETRPDLVRSLAVSGSV 180
+++ +RS Q VVG SYGG VA+ +A+ P+ V + ++ S
Sbjct: 96 SSSGENRSEMFQALCMGKLMEKLEVERFSVVGTSYGGFVAYNMAKMFPEKVEKVVLASSG 155
Query: 181 VAMTDAVNSATMTRLGATSSAELLMPETLKGLKQLLSISMYKKM-WFPDRFYKDYLK 236
V + + N A + R E+++P + L++ + K++ + PD D+ +
Sbjct: 156 VNLRRSDNEAFIARAKCHRIKEVMLPASATDLRRFSGMVSSKRLDYVPDFVLNDFCQ 212
>AT4G33180.1 | chr4:16000282-16002055 FORWARD LENGTH=308
Length = 307
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 96/228 (42%), Gaps = 32/228 (14%)
Query: 12 LKRLMRMAGLRPVDVEIEPGTTMHIWVPKHHVSKKTGTIRPXXXXXXXXXXXXXXXXXXX 71
L+R +R AGL + I+ TT+H W P + ++ RP
Sbjct: 17 LRRCLRAAGLTSQTLSIDSETTIHFWGPPP-LDHRSDDDRPV------------------ 57
Query: 72 XXXXXXXXPNVVLVHGFAAEGIVTWQFNFGVLV-SRYNLYIPDLLFFGKSATASADRSPE 130
++L+HGF + W+ S + +Y PDL+FFG S ++S +R+
Sbjct: 58 ----------MLLLHGFGPSSMWQWRRQMQAFSPSAFRVYSPDLVFFGDSTSSSTNRTEV 107
Query: 131 LQXXXXXXXXXXXXXXXXDVVGFSYGGMVAFKLAETRPDLVRSLAVSGSVVAMTDAVNSA 190
Q +V G SYGG VA+ +A+ P+ V + ++ S + M +
Sbjct: 108 FQAECMAKLMAKIGIGKYNVAGTSYGGFVAYHMAKMWPEKVEKVVIASSGINMRKCDGES 167
Query: 191 TMTRLGATSSAELLMPETLKGLKQLLSISMYKKM--WFPDRFYKDYLK 236
+ R ++++P T + L++++ ++ FPD + D +
Sbjct: 168 LLQRSNCECIEKVMLPSTATEFRTLMALASSWRLVRMFPDALWNDVIN 215
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.137 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,189,515
Number of extensions: 126591
Number of successful extensions: 338
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 324
Number of HSP's successfully gapped: 10
Length of query: 261
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 164
Effective length of database: 8,447,217
Effective search space: 1385343588
Effective search space used: 1385343588
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 110 (47.0 bits)