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Os02g0705400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Pathogen induced protein 2-4.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.46 (0.0302) R2 : 0.242
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.611 (0.0725) R2dC : 0.119 R2C : 0.0807
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.55 (0.0635) R2dN8 : 0.161 R2N8 : 0.123
σ : 0.569
deviance : 148.19
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_____
C
peak time of C : 10.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
130.04 0.536 8.48 0.0896 0.725 -1 0.808 -0.157 0.438 10.7 22.9 763 -- --
130.05 0.531 8.48 0.0816 0.726 -0.98 0.773 -- 0.439 10.7 22.8 781 -- --
132.37 0.536 8.49 0.0446 0.715 -0.95 -- 0.363 0.425 10.8 22.8 789 -- --
132.52 0.536 8.48 0.0929 0.723 -1.02 -- -- 0.437 10.8 22.68 804 -- --
157.01 0.587 8.49 0.207 -- -0.958 -- -0.35 0.482 -- 22.8 789 -- --
141.87 0.558 8.45 0.325 0.618 -- 0.839 -- 0.588 10.7 -- -- -- --
144.8 0.564 8.45 0.359 0.614 -- -- -- 0.59 10.8 -- -- -- --
157.19 0.586 8.49 0.172 -- -0.91 -- -- 0.476 -- 22.8 789 -- --
132.72 0.537 8.48 -- 0.726 -1.05 -- -- 0.43 10.8 22.6 808 -- --
168.1 0.606 8.46 0.346 -- -- -- -- 0.587 -- -- -- -- --
148.19 0.569 8.46 -- 0.611 -- -- -- 0.55 10.7 -- -- -- --
157.91 0.587 8.5 -- -- -0.971 -- -- 0.45 -- 22.8 789 -- --
171.26 0.611 8.47 -- -- -- -- -- 0.548 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 118.32 wind 1 1440 < th dose dependent rect. 6 2
2 118.68 wind 1 1440 < th dose independent rect. 6 3
4 118.93 wind 1 1440 > th dose independent rect. 6 3
8 120.03 temperature 30 4320 > th dose dependent rect. 8 1
49 123.06 temperature 30 4320 > th dose independent rect. 8 1
51 123.06 radiation 1 720 < th dose independent rect. 10 2
64 123.06 radiation 1 720 < th dose dependent rect. 10 2
80 125.38 radiation 1 720 < th dose independent rect. 8 5
81 125.38 radiation 1 720 < th dose dependent rect. 8 5
87 125.63 temperature 30 4320 < th dose independent rect. 8 1
88 125.63 temperature 30 4320 < th dose independent rect. 19 14
93 125.84 temperature 30 4320 < th dose independent rect. 3 6
96 125.90 temperature 30 4320 < th dose independent rect. 1 8
97 125.90 temperature 30 4320 < th dose independent rect. 21 12
115 125.99 temperature 30 4320 < th dose independent rect. 23 10
145 126.72 wind 3 4320 < th dose dependent rect. 4 1
146 126.72 temperature 15 720 > th dose dependent rect. 4 3
151 126.81 radiation 10 4320 < th dose dependent rect. 3 2
152 126.83 radiation 40 4320 < th dose dependent rect. 18 11
168 127.11 temperature 20 720 > th dose independent rect. 5 11
175 127.30 radiation 10 4320 > th dose dependent rect. 5 2
197 127.51 temperature 15 720 > th dose dependent rect. 6 1
201 127.59 temperature 20 720 > th dose independent rect. 21 19
217 127.79 humidity 80 14400 > th dose dependent rect. 5 2
220 127.81 temperature 10 720 > th dose dependent rect. 23 8
227 127.92 humidity 50 14400 > th dose dependent rect. 5 2
237 128.03 temperature 20 720 > th dose independent rect. 6 1
262 128.40 temperature 10 720 > th dose dependent rect. 1 7
270 128.47 temperature 25 720 < th dose dependent rect. 22 11
271 128.47 temperature 25 720 < th dose dependent rect. 22 13
274 128.48 temperature 30 720 < th dose dependent rect. 24 8
285 128.53 temperature 20 720 < th dose independent rect. 23 17
288 128.54 radiation 40 4320 < th dose dependent rect. 18 2
307 128.65 radiation 10 4320 < th dose dependent rect. 1 4
310 128.66 wind 9 14400 < th dose independent rect. 20 1
313 128.67 temperature 20 720 < th dose independent sin 4 NA
323 128.71 temperature 25 720 < th dose dependent sin 8 NA
335 128.77 humidity 90 720 > th dose independent rect. 11 2
358 128.88 wind 3 43200 < th dose dependent rect. 6 1
361 128.89 humidity 90 4320 > th dose independent rect. 7 1
362 128.89 humidity 90 720 > th dose dependent rect. 11 2
363 128.89 temperature 30 720 < th dose dependent rect. 24 5
375 128.93 temperature 20 720 > th dose independent sin 3 NA
410 129.04 radiation 10 4320 > th dose independent rect. 5 2
430 129.05 wind 1 43200 < th dose dependent rect. 6 6
436 129.07 humidity 90 4320 < th dose independent rect. 7 1
448 129.11 wind 1 720 < th dose independent rect. 5 14
459 129.17 temperature 20 720 > th dose independent sin 6 NA
524 129.34 wind 3 43200 < th dose independent rect. 1 1
549 129.44 wind 3 43200 > th dose independent rect. 1 1
553 129.44 wind 1 720 < th dose dependent rect. 5 14
578 129.53 radiation 30 4320 < th dose dependent rect. 18 6
580 129.53 wind 1 720 < th dose dependent rect. 5 17
584 129.55 wind 9 14400 > th dose independent rect. 20 1
595 129.58 humidity 70 43200 > th dose dependent rect. 1 1
598 129.59 temperature 25 720 < th dose dependent rect. 1 2
621 129.64 radiation 30 4320 < th dose dependent rect. 18 4
632 129.66 radiation 1 14400 > th dose dependent rect. 18 1
671 129.73 temperature 20 720 < th dose independent rect. 5 10
701 129.79 wind 3 43200 < th dose independent rect. 6 1
715 129.82 temperature 20 720 < th dose independent rect. 5 8
718 129.83 wind 1 43200 > th dose independent rect. 5 8
722 129.84 temperature 20 720 < th dose independent rect. 5 6
723 129.84 wind 1 43200 > th dose independent rect. 5 10
728 129.85 wind 3 43200 > th dose independent rect. 6 1
729 129.85 humidity 90 4320 > th dose independent rect. 7 4
751 129.89 wind 7 720 > th dose dependent rect. 14 2
784 129.94 humidity 90 4320 < th dose independent rect. 7 4
792 129.95 radiation 10 4320 < th dose dependent rect. 21 8
804 129.98 temperature 20 720 > th dose independent rect. 3 21
826 130.01 temperature 10 270 > th dose dependent sin 5 NA
831 130.01 humidity 90 14400 > th dose dependent rect. 5 8
844 130.04 humidity 90 14400 > th dose independent rect. 10 1
868 130.06 humidity 90 14400 > th dose dependent rect. 4 12
890 130.09 radiation 10 14400 < th dose dependent rect. 18 8
901 130.11 wind 1 43200 > th dose independent rect. 6 5
909 130.12 wind 9 14400 < th dose independent rect. 7 3
919 130.13 wind 9 14400 < th dose dependent rect. 1 1
952 130.17 wind 9 14400 < th dose independent rect. 5 5
957 130.17 radiation 10 4320 < th dose dependent rect. 23 6
963 130.18 radiation 10 4320 < th dose independent rect. 17 14
986 130.20 temperature 20 720 > th dose independent rect. 23 12
988 130.20 humidity 90 14400 > th dose independent rect. 3 12