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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0703800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.96 (0.0124) R2 : 0.00151
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0216 (0.026) R2dN8 : 0.00195 R2N8 : 0.00151
σ : 0.233
deviance : 24.86
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
23.68 0.229 2.95 0.0665 0.0591 -0.149 -0.153 0.0355 0.0297 6.57 1 16 -- --
23.64 0.228 2.95 0.072 0.0621 -0.126 -0.164 -- 0.0306 6.54 1 16 -- --
23.7 0.228 2.95 0.0684 0.0614 -0.13 -- 0.0286 0.031 7.21 1.031 16 -- --
23.7 0.228 2.95 0.0699 0.0617 -0.127 -- -- 0.0313 7.19 1.002 16 -- --
23.89 0.229 2.95 0.0663 -- -0.149 -- 0.0509 0.032 -- 1.031 16 -- --
24.16 0.23 2.95 0.085 0.0936 -- -0.151 -- 0.0285 5.97 -- -- -- --
24.21 0.23 2.95 0.0838 0.0929 -- -- -- 0.0291 6.06 -- -- -- --
23.89 0.229 2.95 0.0688 -- -0.145 -- -- 0.0325 -- 1.002 16 -- --
23.83 0.229 2.95 -- 0.061 -0.134 -- -- 0.0237 7.21 1.03 16 -- --
24.66 0.232 2.95 0.0864 -- -- -- -- 0.0312 -- -- -- -- --
24.4 0.231 2.95 -- 0.0941 -- -- -- 0.0198 6.01 -- -- -- --
24.01 0.228 2.95 -- -- -0.18 -- -- 0.025 -- 1 16 -- --
24.86 0.233 2.96 -- -- -- -- -- 0.0216 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 18.63 wind 3.0 30 < th dose dependent rect. 2 1
3 18.67 wind 1.0 30 < th dose independent rect. 2 1
6 18.67 temperature 15.0 30 > th dose dependent rect. 2 1
7 18.68 humidity 80.0 30 > th dose independent rect. 2 1
11 18.69 atmosphere 1005.0 30 > th dose dependent rect. 2 1
12 18.70 wind 9.0 30 < th dose independent rect. 2 1
13 18.70 temperature 10.0 30 > th dose independent rect. 2 1
15 18.70 temperature 30.0 30 < th dose independent rect. 2 1
16 18.70 humidity 50.0 30 > th dose independent rect. 2 1
19 18.70 atmosphere 995.0 30 > th dose independent rect. 2 1
20 18.70 atmosphere 1010.0 30 < th dose independent rect. 2 1
22 18.70 radiation 1.0 30 < th dose independent rect. 2 1
27 18.70 precipitation 0.1 30 < th dose independent rect. 2 1
28 18.70 temperature 10.0 30 > th dose independent rect. 3 23
29 18.70 humidity 50.0 30 > th dose dependent rect. 2 1
32 18.70 radiation 1.0 30 < th dose dependent rect. 2 1
37 18.70 precipitation 0.1 30 < th dose dependent rect. 2 1
43 18.73 atmosphere 995.0 30 > th dose dependent rect. 2 1
46 18.75 atmosphere 1005.0 30 > th dose independent rect. 2 1
47 18.75 atmosphere 1015.0 30 < th dose dependent rect. 2 1
49 18.87 temperature 30.0 30 < th dose dependent rect. 2 1
56 19.07 wind 9.0 30 < th dose independent rect. 3 23
64 19.17 wind 1.0 30 > th dose independent rect. 2 1
109 21.12 atmosphere 995.0 30 > th dose independent rect. 3 23
114 21.52 precipitation 0.1 30 < th dose independent rect. 3 23
115 21.52 precipitation 0.1 30 < th dose dependent rect. 3 23
119 21.72 wind 1.0 30 < th dose independent rect. 24 3
142 22.32 humidity 90.0 90 < th dose independent rect. 2 1
144 22.32 wind 1.0 10 < th dose independent rect. 14 13
147 22.35 wind 1.0 10 < th dose independent rect. 17 10
150 22.37 wind 9.0 1440 < th dose independent rect. 3 1
151 22.37 temperature 10.0 1440 > th dose independent rect. 3 1
154 22.37 temperature 30.0 1440 < th dose independent rect. 3 1
158 22.37 humidity 50.0 1440 > th dose independent rect. 3 1
167 22.37 atmosphere 995.0 1440 > th dose independent rect. 3 1
168 22.37 radiation 1.0 1440 < th dose independent rect. 3 1
192 22.37 temperature 10.0 1440 > th dose independent rect. 4 23
195 22.37 radiation 1.0 1440 < th dose dependent rect. 3 1
220 22.43 atmosphere 1015.0 30 < th dose independent rect. 3 23
230 22.46 humidity 50.0 30 > th dose independent rect. 3 23
244 22.50 wind 1.0 30 > th dose dependent rect. 2 1
285 22.56 wind 1.0 10 < th dose independent rect. 6 21
300 22.64 atmosphere 1015.0 1440 < th dose independent rect. 3 1
332 22.77 temperature 10.0 30 > th dose dependent rect. 3 23
365 22.84 wind 3.0 10 < th dose dependent rect. 22 5
377 22.88 radiation 10.0 30 < th dose dependent rect. 3 23
389 22.94 humidity 90.0 10 > th dose independent rect. 24 3
393 22.95 wind 3.0 10 < th dose dependent rect. 14 13
413 22.99 wind 9.0 30 < th dose dependent rect. 3 23
448 23.06 wind 1.0 10 > th dose independent sin 16 NA
454 23.08 humidity 90.0 90 < th dose independent rect. 1 5
466 23.09 wind 3.0 10 < th dose dependent rect. 6 21
475 23.11 wind 9.0 90 < th dose dependent rect. 15 12
496 23.16 temperature 25.0 10 < th dose independent rect. 24 3
501 23.16 wind 3.0 10 < th dose dependent rect. 9 18
514 23.17 humidity 50.0 30 > th dose dependent rect. 3 23
517 23.18 temperature 15.0 720 > th dose independent rect. 7 8
542 23.19 radiation 40.0 90 < th dose independent rect. 13 14
543 23.19 temperature 15.0 720 > th dose independent rect. 3 16
555 23.19 radiation 40.0 90 < th dose dependent rect. 13 14
562 23.20 atmosphere 1015.0 720 < th dose independent rect. 7 8
563 23.20 temperature 10.0 720 > th dose independent rect. 15 16
565 23.20 atmosphere 1015.0 720 < th dose independent rect. 3 16
573 23.21 wind 9.0 720 < th dose independent rect. 19 8
574 23.21 temperature 10.0 720 > th dose independent rect. 19 8
576 23.21 temperature 30.0 720 < th dose independent rect. 19 8
577 23.21 humidity 50.0 720 > th dose independent rect. 19 8
579 23.21 atmosphere 995.0 720 > th dose independent rect. 19 8
580 23.21 radiation 1.0 720 < th dose independent rect. 19 8
586 23.21 radiation 40.0 720 < th dose independent rect. 15 16
588 23.21 radiation 10.0 30 < th dose independent rect. 3 23
593 23.21 radiation 1.0 720 < th dose dependent rect. 19 8
615 23.23 atmosphere 995.0 720 > th dose independent rect. 7 8
739 23.30 atmosphere 995.0 90 > th dose independent rect. 3 12
742 23.30 radiation 40.0 90 < th dose dependent rect. 15 12
749 23.31 wind 7.0 90 < th dose independent rect. 15 12
751 23.31 temperature 10.0 720 > th dose dependent rect. 3 1
760 23.32 precipitation 0.1 720 < th dose independent rect. 7 8
761 23.32 precipitation 0.1 720 < th dose independent rect. 19 8
765 23.32 precipitation 0.1 720 < th dose dependent rect. 7 8
766 23.32 precipitation 0.1 720 < th dose dependent rect. 19 8
777 23.33 wind 9.0 90 < th dose independent rect. 3 12
789 23.34 temperature 15.0 90 > th dose independent rect. 3 12
799 23.35 temperature 10.0 90 > th dose independent rect. 15 12
800 23.35 atmosphere 1015.0 90 < th dose independent rect. 3 12
804 23.35 humidity 60.0 720 > th dose dependent rect. 3 1
856 23.36 radiation 40.0 90 < th dose independent rect. 15 12
857 23.36 wind 9.0 720 < th dose independent rect. 15 16
907 23.37 wind 9.0 90 < th dose independent rect. 3 10
933 23.38 wind 1.0 10 < th dose independent sin 16 NA
936 23.38 temperature 15.0 90 > th dose independent rect. 3 10
943 23.38 wind 9.0 90 < th dose dependent rect. 3 10
948 23.39 wind 9.0 720 < th dose independent rect. 7 8
950 23.39 wind 9.0 90 < th dose independent rect. 13 14
974 23.40 atmosphere 995.0 90 > th dose independent rect. 3 10
975 23.40 atmosphere 1015.0 90 < th dose independent rect. 3 10
976 23.40 precipitation 0.1 90 < th dose independent rect. 3 12
977 23.40 temperature 10.0 90 > th dose independent rect. 13 14
995 23.40 precipitation 0.1 90 < th dose dependent rect. 3 12