Os02g0702100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0702100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 439.68 | 0.985 | 3.93 | -1.67 | 1.12 | 3.22 | -2.03 | 2.46 | -0.302 | 8.94 | 5.3 | 283 | -- | -- |
| 441.28 | 0.978 | 3.9 | -1.65 | 1.17 | 2.71 | -2.02 | -- | -0.237 | 8.81 | 4.882 | 293 | -- | -- |
| 453.36 | 0.992 | 3.93 | -1.75 | 1.11 | 3.23 | -- | 2.74 | -0.305 | 9.08 | 5.324 | 271 | -- | -- |
| 455.23 | 0.994 | 3.92 | -1.77 | 1.07 | 2.57 | -- | -- | -0.286 | 9.14 | 5.175 | 271 | -- | -- |
| 510.1 | 1.05 | 3.95 | -1.85 | -- | 3.41 | -- | 2.89 | -0.276 | -- | 6.462 | 136 | -- | -- |
| 487.5 | 1.04 | 3.93 | -2.14 | 0.942 | -- | -1.61 | -- | -0.368 | 10.4 | -- | -- | -- | -- |
| 497.94 | 1.04 | 3.93 | -2.2 | 0.948 | -- | -- | -- | -0.371 | 10.5 | -- | -- | -- | -- |
| 511.41 | 1.05 | 3.94 | -1.91 | -- | 3.28 | -- | -- | -0.262 | -- | 7.327 | 154 | -- | -- |
| 534.16 | 1.08 | 3.87 | -- | 1.26 | 2.95 | -- | -- | -0.124 | 8.55 | 4.284 | 272 | -- | -- |
| 553.08 | 1.1 | 3.96 | -2.22 | -- | -- | -- | -- | -0.375 | -- | -- | -- | -- | -- |
| 625.65 | 1.17 | 3.88 | -- | 0.963 | -- | -- | -- | -0.126 | 10.6 | -- | -- | -- | -- |
| 597.04 | 1.14 | 3.89 | -- | -- | 3.2 | -- | -- | -0.0582 | -- | 5.743 | 140 | -- | -- |
| 682.81 | 1.22 | 3.9 | -- | -- | -- | -- | -- | -0.129 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 432.96 | wind | 7 | 270 | < th | dose independent | rect. | 6 | 23 |
| 2 | 435.31 | wind | 5 | 270 | < th | dose independent | rect. | 7 | 21 |
| 3 | 435.42 | wind | 9 | 270 | < th | dose dependent | rect. | 6 | 22 |
| 9 | 438.18 | wind | 5 | 270 | > th | dose dependent | rect. | 20 | 22 |
| 17 | 438.98 | wind | 9 | 270 | < th | dose dependent | rect. | 9 | 18 |
| 24 | 439.23 | wind | 5 | 270 | < th | dose independent | rect. | 8 | 9 |
| 29 | 439.36 | wind | 5 | 270 | > th | dose dependent | rect. | 3 | 22 |
| 31 | 439.37 | wind | 5 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 33 | 439.45 | wind | 5 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 61 | 440.13 | wind | 5 | 270 | > th | dose dependent | no | NA | NA |
| 65 | 440.20 | wind | 5 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 94 | 440.62 | wind | 5 | 270 | > th | dose dependent | sin | 21 | NA |
| 106 | 440.83 | wind | 5 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 108 | 440.87 | wind | 9 | 270 | < th | dose dependent | rect. | 8 | 9 |
| 120 | 440.97 | wind | 7 | 270 | > th | dose independent | rect. | 19 | 23 |
| 146 | 441.34 | wind | 7 | 270 | > th | dose independent | rect. | 13 | 22 |
| 263 | 442.48 | wind | 7 | 270 | > th | dose independent | rect. | 3 | 22 |
| 288 | 442.75 | wind | 7 | 270 | > th | dose independent | no | NA | NA |
| 289 | 442.75 | wind | 7 | 270 | > th | dose independent | rect. | 7 | 22 |
| 292 | 442.75 | wind | 7 | 270 | > th | dose independent | rect. | 24 | 23 |
| 309 | 442.92 | wind | 9 | 270 | < th | dose dependent | sin | 19 | NA |
| 318 | 443.03 | wind | 7 | 270 | > th | dose independent | sin | 20 | NA |
| 321 | 443.04 | wind | 7 | 270 | > th | dose independent | rect. | 7 | 18 |
| 339 | 443.15 | wind | 7 | 270 | > th | dose dependent | rect. | 11 | 18 |
| 403 | 443.62 | wind | 7 | 270 | < th | dose independent | no | NA | NA |
| 448 | 443.92 | wind | 5 | 270 | < th | dose independent | rect. | 20 | 22 |
| 555 | 444.83 | wind | 7 | 270 | > th | dose independent | rect. | 11 | 18 |
| 566 | 444.90 | wind | 7 | 270 | < th | dose independent | rect. | 18 | 23 |
| 581 | 445.02 | wind | 7 | 270 | > th | dose independent | rect. | 11 | 14 |
| 660 | 445.63 | wind | 5 | 270 | < th | dose independent | rect. | 21 | 19 |
| 670 | 445.69 | wind | 7 | 270 | > th | dose independent | rect. | 11 | 12 |
| 737 | 446.23 | wind | 9 | 270 | < th | dose independent | sin | 17 | NA |