Os02g0697700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0697700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.9 | 0.278 | 12.2 | -0.652 | 1.22 | -0.992 | 0.536 | 1.15 | 0.0864 | 6.31 | 25.5 | 859 | -- | -- |
| 36.55 | 0.282 | 12.1 | -0.455 | 1.17 | -1.09 | 0.713 | -- | 0.127 | 6.27 | 24.7 | 954 | -- | -- |
| 35.58 | 0.278 | 12.2 | -0.671 | 1.22 | -0.983 | -- | 1.3 | 0.0742 | 6.3 | 25.91 | 860 | -- | -- |
| 37.6 | 0.286 | 12.1 | -0.447 | 1.2 | -1.1 | -- | -- | 0.138 | 6.27 | 24.7 | 903 | -- | -- |
| 103.13 | 0.473 | 12.2 | -0.844 | -- | -1.14 | -- | 1.89 | 0.0764 | -- | 44.63 | 1300 | -- | -- |
| 54.26 | 0.345 | 12.1 | -0.129 | 1.17 | -- | 0.545 | -- | 0.365 | 5.87 | -- | -- | -- | -- |
| 54.97 | 0.347 | 12.1 | -0.126 | 1.18 | -- | -- | -- | 0.362 | 5.81 | -- | -- | -- | -- |
| 104.35 | 0.476 | 12.2 | -0.466 | -- | -1.22 | -- | -- | 0.114 | -- | 28.02 | 1308 | -- | -- |
| 42.04 | 0.302 | 12.1 | -- | 1.2 | -0.897 | -- | -- | 0.223 | 6.2 | 24.7 | 873 | -- | -- |
| 126.7 | 0.526 | 12.1 | -0.0895 | -- | -- | -- | -- | 0.39 | -- | -- | -- | -- | -- |
| 55.38 | 0.348 | 12.1 | -- | 1.17 | -- | -- | -- | 0.376 | 5.81 | -- | -- | -- | -- |
| 109.24 | 0.487 | 12.2 | -- | -- | -1 | -- | -- | 0.207 | -- | 28 | 1299 | -- | -- |
| 126.91 | 0.526 | 12.1 | -- | -- | -- | -- | -- | 0.4 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.90 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 19 |
| 12 | 34.35 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 19 |
| 13 | 34.35 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 68 | 34.72 | temperature | 30 | 720 | < th | dose dependent | sin | 10 | NA |
| 126 | 35.09 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 146 | 35.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 185 | 35.40 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 205 | 35.45 | temperature | 30 | 1440 | < th | dose dependent | sin | 14 | NA |
| 217 | 35.50 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 228 | 35.52 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 238 | 35.54 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 244 | 35.54 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 271 | 35.60 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 272 | 35.60 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 8 |
| 280 | 35.62 | temperature | 10 | 1440 | > th | dose dependent | sin | 13 | NA |
| 288 | 35.63 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 4 |
| 289 | 35.63 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 6 |
| 299 | 35.63 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 301 | 35.64 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 399 | 35.76 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 595 | 35.98 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 695 | 36.08 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 847 | 36.21 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 2 |
| 936 | 36.27 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |