Os02g0694100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os02g0694100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 255.97 | 0.752 | 5.1 | 0.743 | 1.85 | -2 | 1.48 | -3.77 | -0.444 | 1.48 | 34.84 | 11 | 20.7 | 21.3 |
| 272.09 | 0.768 | 5.14 | 0.312 | 1.69 | -1.79 | 0.669 | -- | -0.5 | 1.33 | 36.61 | 12 | 20.7 | 21.2 |
| 263.03 | 0.755 | 5.1 | 0.653 | 1.8 | -1.9 | -- | -3.02 | -0.447 | 1.38 | 37 | 12 | 20.4 | 21.5 |
| 272.85 | 0.769 | 5.15 | 0.254 | 1.74 | -1.89 | -- | -- | -0.548 | 1.45 | 36.77 | 10 | 20.8 | 21.2 |
| 295.25 | 0.8 | 5.12 | 0.496 | -- | -2.4 | -- | -2.84 | -0.427 | -- | 69.14 | 693 | 20 | 21.3 |
| 319.78 | 0.838 | 5.11 | 0.617 | 1.35 | -- | 0.581 | -- | -0.317 | 23.9 | -- | -- | -- | -- |
| 321.22 | 0.839 | 5.12 | 0.593 | 1.35 | -- | -- | -- | -0.32 | 24 | -- | -- | -- | -- |
| 297.96 | 0.804 | 5.12 | 0.334 | -- | -2.08 | -- | -- | -0.44 | -- | 90.89 | 708 | 19.7 | 21.3 |
| 274.7 | 0.772 | 5.16 | -- | 1.74 | -1.89 | -- | -- | -0.55 | 1.45 | 36.6 | 10 | 20.7 | 21.3 |
| 435.24 | 0.975 | 5.09 | 0.635 | -- | -- | -- | -- | -0.302 | -- | -- | -- | -- | -- |
| 330.49 | 0.85 | 5.13 | -- | 1.35 | -- | -- | -- | -0.386 | 24 | -- | -- | -- | -- |
| 300.16 | 0.807 | 5.13 | -- | -- | -2.21 | -- | -- | -0.511 | -- | 81.46 | 715 | 19.8 | 21.3 |
| 445.86 | 0.986 | 5.1 | -- | -- | -- | -- | -- | -0.372 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 266.38 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 2 |
| 2 | 266.91 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 21 |
| 41 | 276.17 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 18 |
| 48 | 276.64 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 59 | 277.24 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 63 | 277.47 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 21 |
| 66 | 277.55 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 12 | 19 |
| 70 | 277.69 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 18 |
| 77 | 277.92 | temperature | 25.0 | 720 | < th | dose dependent | sin | 15 | NA |
| 84 | 278.16 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 12 |
| 92 | 278.33 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 94 | 278.36 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 5 |
| 111 | 278.73 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 20 | 3 |
| 188 | 280.12 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 20 | 14 |
| 211 | 280.48 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 218 | 280.56 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 288 | 281.24 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 20 | 9 |
| 298 | 281.37 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 355 | 282.07 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 356 | 282.07 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 418 | 282.75 | temperature | 30.0 | 10 | < th | dose dependent | sin | 7 | NA |
| 433 | 282.86 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 15 | 19 |
| 450 | 283.07 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 5 |
| 484 | 283.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 503 | 283.53 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 13 | 21 |
| 517 | 283.61 | temperature | 25.0 | 10 | < th | dose dependent | sin | 4 | NA |
| 582 | 284.16 | wind | 7.0 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 588 | 284.20 | temperature | 20.0 | 720 | > th | dose independent | rect. | 8 | 20 |
| 608 | 284.34 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 8 |
| 639 | 284.54 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 18 | 19 |
| 652 | 284.60 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 13 |
| 681 | 284.76 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 778 | 285.26 | temperature | 20.0 | 10 | > th | dose dependent | sin | 7 | NA |
| 782 | 285.28 | temperature | 20.0 | 720 | < th | dose independent | rect. | 4 | 20 |
| 807 | 285.39 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 20 | 21 |
| 814 | 285.42 | temperature | 25.0 | 720 | < th | dose independent | rect. | 10 | 22 |
| 821 | 285.45 | temperature | 20.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 837 | 285.52 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 13 | 22 |
| 853 | 285.59 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 900 | 285.79 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 8 |
| 923 | 285.89 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 995 | 286.12 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 19 | 7 |