Os02g0690700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Clathrin adaptor complex, medium chain family protein.
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Os02g0690700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Clathrin adaptor complex, medium chain family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.97 | 0.225 | 12.4 | 0.0197 | 0.368 | 0.52 | 0.3 | -0.168 | 0.138 | 23.4 | 21.2 | 1346 | -- | -- |
| 23.04 | 0.224 | 12.3 | 0.0604 | 0.366 | 0.529 | 0.28 | -- | 0.149 | 23.5 | 21.2 | 1347 | -- | -- |
| 23.34 | 0.225 | 12.4 | 0.0143 | 0.366 | 0.514 | -- | -0.149 | 0.142 | 23.6 | 21.2 | 1344 | -- | -- |
| 23.37 | 0.225 | 12.3 | 0.0487 | 0.368 | 0.53 | -- | -- | 0.147 | 23.7 | 21.29 | 1354 | -- | -- |
| 31.18 | 0.26 | 12.4 | -0.047 | -- | 0.592 | -- | -0.122 | 0.0859 | -- | 21.3 | 2351 | -- | -- |
| 30.88 | 0.261 | 12.3 | 0.28 | 0.392 | -- | 0.23 | -- | 0.292 | 23.6 | -- | -- | -- | -- |
| 31.09 | 0.261 | 12.3 | 0.27 | 0.391 | -- | -- | -- | 0.291 | 23.8 | -- | -- | -- | -- |
| 30.45 | 0.257 | 12.3 | 0.067 | -- | 0.552 | -- | -- | 0.141 | -- | 21.3 | 964 | -- | -- |
| 23.43 | 0.225 | 12.4 | -- | 0.37 | 0.548 | -- | -- | 0.137 | 23.7 | 21.26 | 1367 | -- | -- |
| 40.73 | 0.298 | 12.3 | 0.281 | -- | -- | -- | -- | 0.296 | -- | -- | -- | -- | -- |
| 33.01 | 0.269 | 12.3 | -- | 0.395 | -- | -- | -- | 0.26 | 23.9 | -- | -- | -- | -- |
| 30.55 | 0.257 | 12.3 | -- | -- | 0.576 | -- | -- | 0.132 | -- | 21.23 | 970 | -- | -- |
| 42.82 | 0.305 | 12.3 | -- | -- | -- | -- | -- | 0.264 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.32 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 8 |
| 5 | 22.37 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 14 | 22.42 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 27 | 22.45 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 36 | 22.49 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 5 |
| 40 | 22.50 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 49 | 22.53 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 65 | 22.57 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 3 |
| 68 | 22.58 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 107 | 22.66 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 114 | 22.67 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 143 | 22.70 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 7 |
| 326 | 22.89 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 369 | 22.94 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 6 |
| 378 | 22.95 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 11 |
| 391 | 22.96 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 9 |
| 439 | 23.00 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 450 | 23.01 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 6 |
| 474 | 23.03 | temperature | 20 | 1440 | > th | dose independent | sin | 12 | NA |
| 576 | 23.11 | temperature | 20 | 1440 | < th | dose independent | sin | 12 | NA |
| 662 | 23.17 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 698 | 23.20 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 19 |
| 807 | 23.28 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 817 | 23.28 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 19 |
| 855 | 23.30 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 926 | 23.35 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 953 | 23.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 1000 | 23.39 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |