Os02g0689000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pectinesterase inhibitor domain containing protein.
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Os02g0689000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pectinesterase inhibitor domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 353.65 | 0.884 | 5.73 | 1.29 | 1.05 | -1.36 | -1.22 | -3.04 | -1.73 | 14.4 | 51.08 | 1496 | -- | -- |
| 370.39 | 0.896 | 5.74 | 1.06 | 1.01 | -1.43 | -1.25 | -- | -1.76 | 14.5 | 49 | 1517 | -- | -- |
| 357.74 | 0.881 | 5.74 | 1.28 | 1.21 | -1.4 | -- | -3.24 | -1.74 | 14.3 | 52 | 1378 | -- | -- |
| 373.63 | 0.9 | 5.74 | 0.89 | 1.09 | -1.57 | -- | -- | -1.8 | 14.4 | 48.06 | 1456 | -- | -- |
| 410.9 | 0.944 | 5.75 | 1.17 | -- | -1.71 | -- | -2.86 | -1.8 | -- | 54.11 | 1677 | -- | -- |
| 435.32 | 0.978 | 5.74 | 1 | 1.04 | -- | -1.34 | -- | -1.72 | 14.4 | -- | -- | -- | -- |
| 441.83 | 0.984 | 5.74 | 0.968 | 1.04 | -- | -- | -- | -1.73 | 14.3 | -- | -- | -- | -- |
| 413.41 | 0.951 | 5.75 | 0.964 | -- | -1.49 | -- | -- | -1.78 | -- | 54.11 | 1677 | -- | -- |
| 393.64 | 0.924 | 5.77 | -- | 1.06 | -1.67 | -- | -- | -1.9 | 14.3 | 44 | 1448 | -- | -- |
| 505.72 | 1.05 | 5.75 | 0.924 | -- | -- | -- | -- | -1.76 | -- | -- | -- | -- | -- |
| 466.5 | 1.01 | 5.76 | -- | 1.02 | -- | -- | -- | -1.84 | 14.3 | -- | -- | -- | -- |
| 437.09 | 0.974 | 5.79 | -- | -- | -1.98 | -- | -- | -1.93 | -- | 45 | 1680 | -- | -- |
| 528.24 | 1.07 | 5.77 | -- | -- | -- | -- | -- | -1.86 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 344.66 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 2 | 344.77 | humidity | 70 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 3 | 345.00 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 5 | 346.44 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 7 | 346.87 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 9 | 346.99 | humidity | 60 | 1440 | > th | dose dependent | rect. | 5 | 8 |
| 10 | 347.01 | humidity | 60 | 1440 | > th | dose dependent | rect. | 4 | 10 |
| 28 | 348.01 | humidity | 50 | 1440 | > th | dose dependent | sin | 4 | NA |
| 48 | 348.91 | humidity | 80 | 1440 | > th | dose independent | rect. | 8 | 2 |
| 68 | 349.44 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 113 | 350.49 | humidity | 80 | 1440 | < th | dose independent | rect. | 8 | 2 |
| 163 | 351.50 | humidity | 90 | 1440 | < th | dose dependent | rect. | 21 | 17 |
| 164 | 351.51 | humidity | 90 | 1440 | < th | dose dependent | sin | 5 | NA |
| 216 | 352.38 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 18 |
| 250 | 352.85 | humidity | 80 | 1440 | > th | dose independent | sin | 3 | NA |
| 281 | 353.16 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 10 |
| 328 | 353.82 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 337 | 353.92 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 354 | 354.09 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 363 | 354.13 | humidity | 50 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 631 | 356.64 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 636 | 356.68 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 688 | 357.04 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 729 | 357.40 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 836 | 358.38 | humidity | 90 | 1440 | < th | dose dependent | rect. | 10 | 2 |
| 873 | 358.85 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 16 |
| 875 | 358.86 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 11 |
| 876 | 358.86 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 14 |
| 893 | 358.93 | humidity | 70 | 1440 | > th | dose independent | rect. | 22 | 15 |
| 914 | 359.08 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 938 | 359.23 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 11 |