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Os02g0688500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : ALG6, ALG8 glycosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.1 (0.016) R2 : 0.697
β1 : 1.48 (0.0585) R2dD : 0.442 R2D : 0.328
β2 : 0.667 (0.0388) R2dC : 0.197 R2C : 0.18
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.467 (0.0341) R2dN8 : 0.167 R2N8 : 0.0455
σ : 0.3
deviance : 41.09
__
_____
C
peak time of C : 2.07
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
35.38 0.279 9.09 1.51 0.669 0.577 -0.499 -0.984 0.548 1.31 93.16 525 -- --
36.38 0.281 9.08 1.43 0.638 0.593 -0.37 -- 0.55 1.16 92 477 -- --
36.14 0.28 9.09 1.5 0.651 0.615 -- -0.85 0.551 1.25 92.86 474 -- --
36.89 0.283 9.08 1.44 0.644 0.589 -- -- 0.553 1.1 92 485 -- --
52.68 0.34 9.07 1.42 -- 0.614 -- -0.338 0.592 -- 88.94 16 -- --
40.65 0.299 9.1 1.47 0.667 -- -0.338 -- 0.465 2.07 -- -- -- --
41.09 0.3 9.1 1.48 0.667 -- -- -- 0.467 2.07 -- -- -- --
52.99 0.341 9.07 1.41 -- 0.595 -- -- 0.587 -- 88.94 16 -- --
89.09 0.44 9.1 -- 0.742 0.797 -- -- 0.5 1.35 86.05 2203 -- --
67.77 0.385 9.09 1.51 -- -- -- -- 0.483 -- -- -- -- --
98.85 0.465 9.14 -- 0.695 -- -- -- 0.302 2.12 -- -- -- --
104.95 0.479 9.1 -- -- 0.735 -- -- 0.457 -- 89 13 -- --
127.78 0.528 9.13 -- -- -- -- -- 0.316 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 34.59 humidity 90.0 4320 > th dose dependent rect. 20 1
8 35.65 humidity 80.0 43200 > th dose dependent rect. 20 3
9 35.65 humidity 90.0 1440 > th dose dependent rect. 18 5
10 35.67 humidity 80.0 43200 > th dose dependent rect. 19 5
11 35.67 humidity 90.0 720 > th dose dependent rect. 18 17
42 35.90 humidity 80.0 43200 > th dose dependent rect. 17 8
50 35.97 humidity 90.0 720 > th dose dependent rect. 20 7
78 36.11 humidity 90.0 720 > th dose dependent sin 11 NA
87 36.15 humidity 90.0 1440 > th dose independent rect. 20 1
99 36.18 humidity 90.0 1440 < th dose independent rect. 20 1
119 36.25 humidity 80.0 43200 < th dose independent rect. 2 17
122 36.26 humidity 90.0 720 > th dose dependent rect. 6 21
130 36.31 humidity 80.0 43200 > th dose independent rect. 2 17
136 36.32 humidity 80.0 43200 < th dose independent rect. 3 15
159 36.37 radiation 1.0 1440 < th dose independent rect. 11 1
161 36.37 humidity 90.0 43200 < th dose independent rect. 20 5
162 36.37 radiation 1.0 1440 < th dose dependent sin 22 NA
163 36.37 radiation 1.0 1440 < th dose dependent rect. 11 1
166 36.38 humidity 80.0 43200 > th dose dependent sin 16 NA
174 36.39 radiation 1.0 1440 < th dose dependent rect. 7 12
176 36.39 radiation 1.0 1440 < th dose dependent rect. 7 15
177 36.39 radiation 1.0 1440 < th dose dependent rect. 7 17
199 36.43 radiation 1.0 1440 < th dose dependent rect. 11 9
200 36.43 humidity 90.0 720 > th dose dependent rect. 3 23
205 36.44 radiation 1.0 1440 < th dose dependent rect. 11 11
207 36.44 radiation 1.0 1440 < th dose dependent rect. 11 13
224 36.46 atmosphere 1005.0 270 > th dose dependent rect. 23 8
236 36.47 radiation 1.0 1440 < th dose independent rect. 12 3
240 36.47 radiation 1.0 1440 < th dose dependent rect. 12 3
260 36.49 humidity 90.0 4320 > th dose independent rect. 18 4
281 36.51 humidity 70.0 43200 > th dose dependent rect. 11 13
288 36.52 humidity 90.0 43200 > th dose independent rect. 21 1
291 36.52 humidity 90.0 720 > th dose dependent no NA NA
306 36.53 humidity 90.0 720 > th dose dependent rect. 11 23
330 36.56 humidity 80.0 1440 < th dose independent rect. 17 2
370 36.60 humidity 90.0 43200 < th dose independent rect. 21 1
371 36.60 humidity 80.0 1440 > th dose independent rect. 17 2
373 36.60 humidity 90.0 43200 > th dose independent rect. 20 5
378 36.60 humidity 80.0 43200 > th dose dependent rect. 14 20
383 36.61 precipitation 0.1 1440 > th dose independent rect. 15 3
384 36.61 temperature 25.0 1440 < th dose independent rect. 18 8
385 36.61 humidity 80.0 1440 > th dose independent rect. 11 10
403 36.62 humidity 90.0 720 > th dose dependent rect. 24 23
416 36.64 radiation 1.0 1440 > th dose independent rect. 13 2
423 36.64 temperature 25.0 1440 > th dose dependent rect. 14 12
442 36.66 temperature 25.0 1440 < th dose independent rect. 19 6
458 36.67 precipitation 0.1 1440 < th dose independent rect. 15 3
462 36.67 temperature 25.0 1440 > th dose independent rect. 18 7
467 36.67 precipitation 0.1 1440 < th dose dependent rect. 15 3
484 36.68 temperature 25.0 1440 > th dose dependent rect. 14 5
491 36.69 humidity 80.0 43200 < th dose independent sin 1 NA
497 36.69 humidity 70.0 43200 > th dose dependent sin 19 NA
528 36.71 humidity 80.0 43200 > th dose independent sin 19 NA
535 36.71 temperature 25.0 1440 > th dose dependent rect. 17 1
553 36.72 humidity 80.0 43200 < th dose independent sin 19 NA
555 36.72 temperature 25.0 1440 > th dose independent rect. 19 5
556 36.72 humidity 80.0 43200 > th dose independent rect. 11 13
558 36.72 temperature 25.0 1440 > th dose dependent rect. 14 1
573 36.73 humidity 80.0 43200 > th dose independent sin 2 NA
576 36.73 humidity 80.0 1440 > th dose independent rect. 14 7
594 36.74 humidity 90.0 43200 < th dose independent rect. 19 13
595 36.74 humidity 80.0 43200 < th dose independent rect. 10 14
617 36.75 temperature 25.0 1440 > th dose dependent sin 15 NA
619 36.75 humidity 80.0 43200 > th dose dependent no NA NA
644 36.77 humidity 80.0 1440 < th dose independent rect. 11 9
657 36.77 humidity 80.0 43200 > th dose dependent rect. 6 23
662 36.78 precipitation 0.1 1440 < th dose independent rect. 12 6
672 36.78 precipitation 0.1 1440 < th dose dependent rect. 12 6
680 36.78 humidity 80.0 43200 > th dose dependent rect. 3 23
732 36.81 humidity 90.0 43200 < th dose independent sin 13 NA
775 36.82 humidity 80.0 43200 > th dose dependent rect. 22 23
802 36.84 humidity 90.0 1440 > th dose independent rect. 9 9
816 36.85 humidity 80.0 43200 > th dose independent rect. 5 10
838 36.86 humidity 70.0 43200 > th dose dependent rect. 2 17
901 36.89 radiation 1.0 1440 < th dose dependent rect. 23 19
904 36.89 radiation 1.0 1440 < th dose dependent rect. 21 21
912 36.90 humidity 80.0 43200 < th dose independent rect. 12 11
937 36.91 precipitation 0.1 1440 > th dose independent rect. 12 6
949 36.91 precipitation 0.1 1440 > th dose dependent rect. 15 3
968 36.92 humidity 90.0 43200 > th dose independent rect. 19 12