Os02g0682700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0682700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.84 | 0.39 | 6.98 | 0.538 | 0.408 | 0.505 | 0.521 | -0.143 | 0.314 | 2.15 | 8.17 | 9 | -- | -- |
| 68.23 | 0.385 | 6.98 | 0.541 | 0.396 | 0.519 | 0.385 | -- | 0.319 | 2.25 | 8.338 | 5 | -- | -- |
| 68.61 | 0.386 | 6.98 | 0.549 | 0.405 | 0.503 | -- | 0.159 | 0.321 | 1.99 | 8.33 | 5 | -- | -- |
| 68.77 | 0.386 | 6.98 | 0.539 | 0.407 | 0.505 | -- | -- | 0.322 | 2.04 | 8.34 | 5 | -- | -- |
| 73.41 | 0.399 | 6.98 | 0.515 | -- | 0.732 | -- | 0.136 | 0.327 | -- | 8.33 | 5 | -- | -- |
| 76.46 | 0.41 | 6.99 | 0.576 | 0.922 | -- | 0.291 | -- | 0.321 | 0.83 | -- | -- | -- | -- |
| 76.81 | 0.41 | 6.99 | 0.565 | 0.921 | -- | -- | -- | 0.32 | 0.8 | -- | -- | -- | -- |
| 73.52 | 0.399 | 6.98 | 0.53 | -- | 0.728 | -- | -- | 0.325 | -- | 8.34 | 5 | -- | -- |
| 76.28 | 0.407 | 6.99 | -- | 0.408 | 0.52 | -- | -- | 0.258 | 2.15 | 8.34 | 5 | -- | -- |
| 129.78 | 0.532 | 6.97 | 0.599 | -- | -- | -- | -- | 0.337 | -- | -- | -- | -- | -- |
| 85.23 | 0.432 | 7 | -- | 0.93 | -- | -- | -- | 0.257 | 0.827 | -- | -- | -- | -- |
| 80.99 | 0.419 | 6.98 | -- | -- | 0.74 | -- | -- | 0.284 | -- | 8.34 | 5 | -- | -- |
| 139.23 | 0.551 | 6.99 | -- | -- | -- | -- | -- | 0.27 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.47 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 3 | 68.76 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 24 | 17 |
| 4 | 68.83 | radiation | 20.0 | 90 | < th | dose dependent | sin | 3 | NA |
| 5 | 68.83 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 6 | 68.87 | radiation | 10.0 | 270 | < th | dose independent | rect. | 24 | 17 |
| 10 | 69.01 | radiation | 20.0 | 10 | < th | dose dependent | sin | 3 | NA |
| 16 | 69.11 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 14 |
| 57 | 69.53 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 4 | 13 |
| 68 | 69.60 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 4 | 11 |
| 99 | 69.74 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 108 | 69.78 | wind | 5.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 116 | 69.80 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 14 | 1 |
| 131 | 69.88 | wind | 5.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 140 | 69.92 | radiation | 10.0 | 90 | < th | dose independent | sin | 3 | NA |
| 229 | 70.27 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 10 | 22 |
| 265 | 70.36 | wind | 5.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 290 | 70.40 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 336 | 70.49 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 350 | 70.51 | radiation | 20.0 | 10 | < th | dose dependent | no | NA | NA |
| 354 | 70.51 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 370 | 70.54 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 3 | 15 |
| 372 | 70.54 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 391 | 70.59 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 13 | 16 |
| 400 | 70.61 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 405 | 70.61 | radiation | 20.0 | 30 | < th | dose independent | rect. | 3 | 19 |
| 445 | 70.65 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 11 | 19 |
| 459 | 70.67 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 485 | 70.71 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 4 | 18 |
| 522 | 70.77 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 531 | 70.78 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 532 | 70.78 | radiation | 20.0 | 30 | < th | dose independent | rect. | 24 | 22 |
| 533 | 70.78 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 2 |
| 546 | 70.80 | humidity | 80.0 | 10 | > th | dose independent | rect. | 3 | 15 |
| 555 | 70.81 | radiation | 20.0 | 270 | < th | dose independent | rect. | 13 | 16 |
| 570 | 70.83 | wind | 3.0 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 579 | 70.84 | wind | 3.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 580 | 70.84 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 601 | 70.86 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 626 | 70.89 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 6 | 10 |
| 627 | 70.89 | humidity | 80.0 | 10 | > th | dose independent | rect. | 3 | 13 |
| 653 | 70.91 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 24 | 6 |
| 665 | 70.92 | radiation | 20.0 | 270 | < th | dose independent | rect. | 11 | 19 |
| 673 | 70.93 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 674 | 70.93 | radiation | 10.0 | 90 | < th | dose independent | rect. | 7 | 23 |
| 723 | 70.98 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 738 | 70.99 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 4 |
| 741 | 70.99 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 752 | 70.99 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 786 | 71.02 | radiation | 10.0 | 10 | < th | dose independent | rect. | 12 | 18 |
| 799 | 71.03 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 809 | 71.03 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 811 | 71.04 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 815 | 71.04 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 818 | 71.04 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 24 | 15 |
| 821 | 71.05 | wind | 3.0 | 10 | < th | dose independent | rect. | 4 | 2 |
| 823 | 71.05 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 826 | 71.05 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 838 | 71.06 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 840 | 71.06 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 841 | 71.06 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 844 | 71.06 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 845 | 71.06 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 850 | 71.06 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 6 |
| 857 | 71.06 | radiation | 10.0 | 270 | < th | dose independent | rect. | 9 | 21 |
| 860 | 71.06 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 865 | 71.06 | wind | 9.0 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 866 | 71.06 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 881 | 71.07 | radiation | 10.0 | 10 | < th | dose independent | rect. | 7 | 23 |
| 908 | 71.09 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 3 | 11 |
| 915 | 71.09 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 920 | 71.10 | radiation | 10.0 | 10 | < th | dose independent | rect. | 10 | 20 |
| 937 | 71.11 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 939 | 71.11 | radiation | 20.0 | 30 | < th | dose independent | rect. | 24 | 20 |
| 942 | 71.11 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 950 | 71.11 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 984 | 71.14 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 986 | 71.14 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 987 | 71.14 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 990 | 71.14 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 991 | 71.14 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 6 |