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Os02g0672400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0193) R2 : 0.453
β1 : 0.972 (0.0707) R2dD : 0.235 R2D : 0.202
β2 : 0.664 (0.0487) R2dC : 0.225 R2C : 0.213
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.19 (0.0412) R2dN8 : 0.0343 R2N8 : -0.00682
σ : 0.363
deviance : 60.11
__
_____
C
peak time of C : 20.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
49.62 0.331 10.7 1.04 0.623 0.633 -0.933 -0.0512 0.21 15.7 0.9795 30 -- --
49.62 0.328 10.7 1.03 0.618 0.627 -0.899 -- 0.207 15.7 0.984 30 -- --
51.36 0.334 10.7 1.03 0.623 0.631 -- 0.348 0.213 15.6 0.9847 32 -- --
51.43 0.334 10.7 1.06 0.663 0.635 -- -- 0.223 15.9 0.1397 55 -- --
65.05 0.378 10.7 0.98 -- 0.417 -- 0.257 0.187 -- 1.072 23 -- --
60.11 0.363 10.7 0.971 0.664 -- -0.0411 -- 0.19 20.4 -- -- -- --
60.11 0.363 10.7 0.972 0.664 -- -- -- 0.19 20.4 -- -- -- --
65.47 0.378 10.7 0.984 -- 0.418 -- -- 0.189 -- 1.072 23 -- --
78.72 0.413 10.8 -- 0.613 0.586 -- -- 0.105 16.2 1.17 57 -- --
84.64 0.43 10.7 0.968 -- -- -- -- 0.184 -- -- -- -- --
85.01 0.431 10.8 -- 0.66 -- -- -- 0.0821 20.5 -- -- -- --
90.98 0.446 10.8 -- -- 0.41 -- -- 0.0799 -- 1.17 57 -- --
109.37 0.488 10.8 -- -- -- -- -- 0.0761 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 42.77 radiation 20.0 30 < th dose dependent sin 12 NA
4 43.95 radiation 1.0 30 < th dose independent sin 12 NA
8 44.28 radiation 40.0 270 < th dose dependent rect. 8 18
10 44.40 radiation 40.0 270 < th dose dependent rect. 7 20
19 44.70 radiation 10.0 270 < th dose dependent rect. 10 17
26 44.81 radiation 10.0 270 < th dose dependent rect. 7 20
28 44.82 radiation 10.0 270 < th dose dependent rect. 15 12
39 45.02 precipitation 0.1 270 < th dose independent rect. 3 14
42 45.02 precipitation 0.1 270 < th dose dependent rect. 3 14
64 45.41 radiation 1.0 270 < th dose independent rect. 13 14
78 45.53 humidity 50.0 270 > th dose independent rect. 17 10
85 45.64 radiation 40.0 270 < th dose independent rect. 8 18
90 45.70 wind 9.0 270 < th dose independent rect. 17 10
91 45.72 radiation 10.0 270 < th dose independent rect. 17 10
92 45.74 atmosphere 995.0 270 > th dose independent rect. 17 10
93 45.75 humidity 50.0 270 > th dose dependent rect. 17 9
101 45.85 temperature 10.0 270 > th dose independent rect. 17 10
105 45.85 temperature 10.0 270 > th dose independent rect. 3 14
106 45.85 atmosphere 1015.0 270 < th dose independent rect. 3 14
119 46.04 radiation 20.0 270 < th dose independent rect. 8 18
122 46.07 temperature 30.0 270 < th dose independent rect. 7 19
138 46.18 temperature 10.0 270 > th dose dependent rect. 12 10
139 46.19 temperature 30.0 270 < th dose independent rect. 8 17
144 46.24 radiation 1.0 270 < th dose independent rect. 7 20
151 46.29 radiation 1.0 90 > th dose independent rect. 15 17
153 46.32 temperature 30.0 270 < th dose independent rect. 17 10
162 46.38 humidity 50.0 270 > th dose dependent rect. 7 20
165 46.40 humidity 50.0 270 > th dose dependent rect. 8 18
168 46.43 temperature 30.0 270 < th dose independent rect. 7 8
177 46.49 wind 9.0 270 < th dose independent rect. 3 14
184 46.52 humidity 50.0 270 > th dose independent rect. 7 19
200 46.62 precipitation 0.1 270 < th dose independent rect. 1 7
201 46.62 precipitation 0.1 270 < th dose independent rect. 17 10
203 46.62 precipitation 0.1 270 < th dose dependent rect. 1 7
204 46.62 precipitation 0.1 270 < th dose dependent rect. 17 10
205 46.63 radiation 1.0 90 > th dose independent sin 12 NA
206 46.63 humidity 50.0 270 > th dose independent rect. 8 17
239 46.83 wind 5.0 270 < th dose independent rect. 2 5
247 46.86 precipitation 0.1 270 < th dose independent rect. 2 5
248 46.86 precipitation 0.1 270 < th dose dependent rect. 2 5
258 46.90 wind 7.0 270 < th dose independent rect. 1 7
269 46.91 wind 9.0 270 < th dose independent rect. 8 17
304 47.06 humidity 50.0 90 > th dose dependent rect. 11 16
306 47.08 temperature 15.0 270 > th dose independent rect. 7 6
308 47.08 radiation 1.0 270 > th dose independent rect. 11 20
313 47.12 temperature 10.0 270 > th dose independent rect. 1 7
315 47.12 temperature 30.0 270 < th dose independent rect. 1 7
316 47.12 humidity 50.0 270 > th dose independent rect. 1 7
318 47.12 atmosphere 995.0 270 > th dose independent rect. 1 7
319 47.12 atmosphere 1015.0 270 < th dose independent rect. 1 7
321 47.12 temperature 10.0 270 > th dose independent rect. 8 17
332 47.16 radiation 40.0 270 < th dose independent rect. 1 7
336 47.16 precipitation 0.1 270 < th dose independent rect. 13 18
337 47.16 precipitation 0.1 270 < th dose dependent rect. 13 18
338 47.17 wind 9.0 270 < th dose independent rect. 7 19
340 47.17 humidity 90.0 10 < th dose dependent rect. 15 17
356 47.25 atmosphere 995.0 270 > th dose independent rect. 8 17
376 47.29 precipitation 0.1 90 < th dose independent rect. 15 17
379 47.29 precipitation 0.1 90 < th dose dependent rect. 15 17
380 47.29 temperature 10.0 90 > th dose dependent rect. 14 18
381 47.30 wind 9.0 270 < th dose dependent rect. 2 5
384 47.32 temperature 10.0 270 > th dose independent rect. 2 5
386 47.32 temperature 30.0 270 < th dose independent rect. 2 5
387 47.32 humidity 50.0 270 > th dose independent rect. 2 5
389 47.32 atmosphere 995.0 270 > th dose independent rect. 2 5
390 47.32 atmosphere 1015.0 270 < th dose independent rect. 2 5
391 47.32 radiation 40.0 270 < th dose independent rect. 2 5
393 47.32 temperature 10.0 270 > th dose independent rect. 7 19
404 47.34 humidity 90.0 90 < th dose dependent rect. 14 18
406 47.35 atmosphere 995.0 270 > th dose independent rect. 7 19
417 47.38 temperature 10.0 270 > th dose dependent rect. 12 19
435 47.46 atmosphere 995.0 90 > th dose independent rect. 8 7
460 47.55 wind 9.0 90 < th dose independent rect. 8 7
461 47.55 humidity 70.0 270 > th dose independent rect. 15 11
468 47.57 radiation 1.0 270 > th dose independent rect. 7 6
476 47.59 humidity 50.0 270 > th dose independent rect. 7 7
482 47.60 temperature 10.0 10 > th dose dependent rect. 14 19
495 47.63 temperature 15.0 270 > th dose independent rect. 8 4
498 47.63 atmosphere 1015.0 90 < th dose independent rect. 8 7
500 47.63 temperature 10.0 90 > th dose independent rect. 15 17
507 47.64 precipitation 0.1 90 < th dose independent rect. 8 7
509 47.64 precipitation 0.1 90 < th dose dependent rect. 8 7
515 47.65 humidity 70.0 90 > th dose dependent rect. 13 14
531 47.70 humidity 70.0 270 > th dose independent rect. 7 20
534 47.71 humidity 70.0 270 > th dose independent rect. 13 13
542 47.73 radiation 40.0 90 < th dose independent rect. 15 17
576 47.76 humidity 70.0 270 > th dose independent rect. 10 16
577 47.76 temperature 10.0 270 > th dose independent rect. 13 18
578 47.76 humidity 70.0 270 > th dose independent rect. 8 18
584 47.77 wind 9.0 90 < th dose independent rect. 15 17
595 47.79 radiation 1.0 270 > th dose independent rect. 8 4
599 47.79 precipitation 0.1 270 < th dose independent rect. 8 17
603 47.79 precipitation 0.1 270 < th dose dependent rect. 8 17
606 47.80 radiation 1.0 30 > th dose dependent rect. 16 16
616 47.84 wind 9.0 270 < th dose dependent rect. 1 7
621 47.85 precipitation 0.1 270 < th dose independent rect. 12 20
623 47.85 precipitation 0.1 270 < th dose dependent rect. 12 20
624 47.86 temperature 30.0 720 < th dose independent rect. 17 2
629 47.86 wind 9.0 270 < th dose dependent rect. 17 9
630 47.87 wind 7.0 270 < th dose independent rect. 8 4
631 47.87 radiation 40.0 270 < th dose independent rect. 7 7
636 47.88 atmosphere 995.0 270 > th dose independent rect. 3 14
644 47.90 wind 9.0 270 < th dose independent rect. 13 18
645 47.90 precipitation 0.1 270 < th dose independent rect. 7 19
648 47.90 precipitation 0.1 270 < th dose dependent rect. 7 19
668 47.94 radiation 40.0 270 < th dose dependent rect. 2 5
728 48.06 temperature 10.0 270 > th dose dependent rect. 3 15
738 48.08 radiation 1.0 30 > th dose dependent sin 12 NA
747 48.09 humidity 50.0 270 > th dose dependent rect. 2 5
755 48.10 wind 1.0 90 > th dose independent rect. 8 7
784 48.15 humidity 50.0 720 > th dose dependent rect. 17 2
792 48.18 humidity 50.0 30 > th dose dependent sin 14 NA
811 48.22 temperature 10.0 10 > th dose dependent rect. 5 15
844 48.27 humidity 90.0 720 < th dose dependent rect. 20 1
854 48.29 atmosphere 995.0 10 > th dose independent rect. 9 7
881 48.33 radiation 40.0 270 < th dose dependent rect. 1 7
884 48.34 precipitation 0.1 10 < th dose independent rect. 16 17
887 48.34 precipitation 0.1 10 < th dose dependent rect. 16 17
930 48.41 precipitation 0.1 270 < th dose independent rect. 8 4
943 48.41 precipitation 0.1 270 < th dose dependent rect. 8 4
964 48.44 humidity 50.0 270 > th dose dependent rect. 1 7
969 48.46 humidity 80.0 720 < th dose independent rect. 20 1
971 48.46 atmosphere 995.0 270 > th dose independent rect. 8 4
972 48.46 atmosphere 1015.0 270 < th dose independent rect. 8 4
976 48.46 temperature 10.0 270 > th dose independent rect. 12 20