FiT-DB / Search/ Help/ Sample detail
|
Os02g0664200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to UDP-glucose:glycoprotein glucosyltransferase 1 precursor (EC 2.4.1.-) (UDP-glucose ceramide glucosyltransferase-like 1) (UDP-- Glc:glycoprotein glucosyltransferase) (HUGT1).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.17 | 0.221 | 12.6 | 0.142 | 0.27 | 0.546 | -0.00282 | -1.25 | 0.392 | 0.199 | 93.72 | 283 | -- | -- |
| 23.41 | 0.225 | 12.6 | 0.129 | 0.269 | 0.546 | -0.0189 | -- | 0.388 | 0.0288 | 93.79 | 282 | -- | -- |
| 22.17 | 0.219 | 12.6 | 0.144 | 0.267 | 0.563 | -- | -1.27 | 0.392 | 0.197 | 93.79 | 277 | -- | -- |
| 23.42 | 0.225 | 12.6 | 0.126 | 0.27 | 0.546 | -- | -- | 0.387 | 0.0237 | 93.77 | 282 | -- | -- |
| 26.35 | 0.239 | 12.6 | 0.128 | -- | 0.541 | -- | -1.22 | 0.402 | -- | 93.44 | 181 | -- | -- |
| 25.6 | 0.237 | 12.6 | 0.147 | 0.302 | -- | 0.00247 | -- | 0.345 | 1.48 | -- | -- | -- | -- |
| 25.6 | 0.237 | 12.6 | 0.147 | 0.302 | -- | -- | -- | 0.345 | 1.48 | -- | -- | -- | -- |
| 27.57 | 0.245 | 12.5 | 0.147 | -- | 0.428 | -- | -- | 0.417 | -- | 92.32 | 219 | -- | -- |
| 23.83 | 0.227 | 12.6 | -- | 0.269 | 0.544 | -- | -- | 0.377 | 24 | 93.63 | 282 | -- | -- |
| 31.21 | 0.261 | 12.6 | 0.159 | -- | -- | -- | -- | 0.351 | -- | -- | -- | -- | -- |
| 26.17 | 0.239 | 12.6 | -- | 0.305 | -- | -- | -- | 0.328 | 1.5 | -- | -- | -- | -- |
| 27.39 | 0.244 | 12.5 | -- | -- | 0.362 | -- | -- | 0.399 | -- | 89.72 | 171 | -- | -- |
| 31.88 | 0.264 | 12.6 | -- | -- | -- | -- | -- | 0.333 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.19 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 2 | 22.24 | radiation | 1 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 4 | 22.35 | radiation | 1 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 5 | 22.35 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 6 | 22.35 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 7 | 22.35 | radiation | 10 | 1440 | < th | dose dependent | rect. | 10 | 5 |
| 10 | 22.37 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 22 | 10 |
| 42 | 22.56 | atmosphere | 1005 | 90 | > th | dose dependent | sin | 8 | NA |
| 49 | 22.59 | atmosphere | 1005 | 10 | > th | dose dependent | sin | 7 | NA |
| 78 | 22.69 | atmosphere | 1005 | 270 | > th | dose dependent | sin | 10 | NA |
| 81 | 22.69 | humidity | 90 | 270 | > th | dose dependent | rect. | 16 | 15 |
| 129 | 22.77 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 133 | 22.77 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 134 | 22.77 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 141 | 22.78 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 22 | 14 |
| 157 | 22.81 | humidity | 60 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 178 | 22.85 | humidity | 60 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 180 | 22.85 | humidity | 60 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 182 | 22.85 | radiation | 20 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 233 | 22.85 | humidity | 60 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 235 | 22.85 | humidity | 60 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 237 | 22.85 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 295 | 22.87 | humidity | 90 | 270 | > th | dose dependent | sin | 10 | NA |
| 309 | 22.87 | humidity | 90 | 30 | > th | dose dependent | rect. | 1 | 21 |
| 318 | 22.88 | humidity | 90 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 331 | 22.90 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 22 | 14 |
| 343 | 22.91 | humidity | 90 | 720 | > th | dose independent | rect. | 20 | 1 |
| 346 | 22.91 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 367 | 22.92 | radiation | 10 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 404 | 22.96 | humidity | 90 | 270 | > th | dose dependent | rect. | 23 | 8 |
| 409 | 22.97 | humidity | 90 | 270 | > th | dose dependent | no | NA | NA |
| 426 | 22.98 | humidity | 90 | 30 | > th | dose dependent | rect. | 1 | 8 |
| 500 | 23.01 | humidity | 90 | 30 | > th | dose dependent | rect. | 1 | 19 |
| 506 | 23.01 | humidity | 90 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 577 | 23.06 | humidity | 90 | 30 | > th | dose dependent | rect. | 1 | 13 |
| 588 | 23.07 | humidity | 60 | 14400 | > th | dose independent | rect. | 23 | 9 |
| 604 | 23.07 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 17 | 19 |
| 639 | 23.09 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 22 | 11 |
| 662 | 23.11 | radiation | 20 | 1440 | < th | dose dependent | sin | 18 | NA |
| 672 | 23.12 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 20 | 13 |
| 688 | 23.13 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 21 | 4 |
| 713 | 23.15 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 736 | 23.18 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 21 | 4 |
| 822 | 23.21 | wind | 7 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 837 | 23.23 | humidity | 90 | 720 | > th | dose independent | rect. | 20 | 5 |
| 850 | 23.24 | humidity | 90 | 720 | < th | dose independent | rect. | 20 | 5 |
| 851 | 23.24 | humidity | 60 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 860 | 23.25 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 876 | 23.27 | radiation | 10 | 1440 | < th | dose independent | sin | 17 | NA |
| 894 | 23.28 | wind | 9 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 931 | 23.28 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 22 | 22 |
| 932 | 23.29 | atmosphere | 1005 | 10 | > th | dose independent | sin | 8 | NA |
| 998 | 23.31 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 21 | 10 |
