Os02g0661300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0661300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 137.56 | 0.551 | 5.51 | 0.578 | 0.433 | 1.16 | 0.0047 | -1.23 | -0.0412 | 9.96 | 24.6 | 19 | -- | -- |
| 138.24 | 0.548 | 5.49 | 0.738 | 0.447 | 1.08 | -0.121 | -- | 0.000499 | 9.88 | 24.5 | 19 | -- | -- |
| 137.56 | 0.546 | 5.51 | 0.578 | 0.432 | 1.16 | -- | -1.23 | -0.0412 | 9.96 | 24.6 | 18 | -- | -- |
| 138.25 | 0.548 | 5.49 | 0.729 | 0.441 | 1.05 | -- | -- | 0.000638 | 10.1 | 24.5 | 18 | -- | -- |
| 148.03 | 0.567 | 5.53 | 0.521 | -- | 1.3 | -- | -1.45 | -0.0657 | -- | 24.5 | 12 | -- | -- |
| 154.47 | 0.583 | 5.47 | 0.886 | 0.691 | -- | 0.303 | -- | 0.109 | 12.5 | -- | -- | -- | -- |
| 154.85 | 0.583 | 5.47 | 0.897 | 0.69 | -- | -- | -- | 0.11 | 12.5 | -- | -- | -- | -- |
| 149.12 | 0.569 | 5.51 | 0.695 | -- | 1.19 | -- | -- | -0.0324 | -- | 24.16 | 12 | -- | -- |
| 151.08 | 0.572 | 5.53 | -- | 0.407 | 1.22 | -- | -- | -0.15 | 9.52 | 22.87 | 18 | -- | -- |
| 184.71 | 0.635 | 5.48 | 0.873 | -- | -- | -- | -- | 0.0984 | -- | -- | -- | -- | -- |
| 176.05 | 0.621 | 5.49 | -- | 0.677 | -- | -- | -- | 0.00991 | 12.4 | -- | -- | -- | -- |
| 158.76 | 0.587 | 5.55 | -- | -- | 1.74 | -- | -- | -0.195 | -- | 14.06 | 5 | -- | -- |
| 204.83 | 0.668 | 5.5 | -- | -- | -- | -- | -- | 0.00153 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 134.80 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 3 | 135.16 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 12 |
| 7 | 135.74 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 22 | 135.81 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 23 | 135.85 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 30 | 136.43 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 33 | 136.59 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 39 | 136.75 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 42 | 136.87 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 7 | 15 |
| 46 | 136.95 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 7 | 3 |
| 51 | 136.99 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 57 | 137.07 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 7 | 13 |
| 58 | 137.09 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 4 | 18 |
| 67 | 137.17 | temperature | 25.0 | 720 | < th | dose independent | rect. | 7 | 2 |
| 79 | 137.31 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 83 | 137.38 | temperature | 10.0 | 720 | > th | dose dependent | sin | 4 | NA |
| 85 | 137.38 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 7 | 17 |
| 90 | 137.43 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 113 | 137.60 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 1 | 21 |
| 127 | 137.71 | radiation | 20.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 142 | 137.72 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 4 | 16 |
| 180 | 137.97 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 182 | 137.98 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 212 | 138.09 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 3 | 14 |
| 218 | 138.11 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 7 | 2 |
| 221 | 138.12 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 24 | 7 |
| 252 | 138.24 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 10 | 23 |
| 253 | 138.25 | temperature | 25.0 | 10 | > th | dose dependent | no | NA | NA |
| 272 | 138.29 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 9 | 1 |
| 348 | 138.49 | temperature | 20.0 | 30 | > th | dose dependent | sin | 21 | NA |
| 401 | 138.61 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 460 | 138.74 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 484 | 138.80 | temperature | 10.0 | 270 | > th | dose dependent | sin | 0 | NA |
| 485 | 138.80 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 3 |
| 500 | 138.86 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 501 | 138.86 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 511 | 138.88 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 2 | 1 |
| 512 | 138.88 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 545 | 138.95 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 5 |
| 546 | 138.96 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 17 |
| 554 | 138.98 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 23 |
| 589 | 139.08 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 607 | 139.14 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 19 | 2 |
| 612 | 139.15 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 11 | 4 |
| 619 | 139.16 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 11 |
| 634 | 139.22 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 8 | 8 |
| 651 | 139.23 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 13 | 2 |
| 653 | 139.23 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 19 | 6 |
| 661 | 139.25 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 675 | 139.27 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 702 | 139.31 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 23 |
| 710 | 139.34 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 731 | 139.40 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 736 | 139.42 | temperature | 30.0 | 720 | > th | dose independent | rect. | 9 | 8 |
| 749 | 139.45 | wind | 7.0 | 4320 | < th | dose independent | rect. | 19 | 8 |
| 756 | 139.47 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 9 |
| 781 | 139.49 | temperature | 30.0 | 720 | < th | dose independent | rect. | 22 | 14 |
| 789 | 139.51 | wind | 7.0 | 4320 | < th | dose independent | rect. | 19 | 6 |
| 795 | 139.52 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 7 |
| 801 | 139.53 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 17 |
| 834 | 139.56 | wind | 7.0 | 4320 | > th | dose independent | rect. | 18 | 9 |
| 838 | 139.57 | temperature | 25.0 | 720 | > th | dose independent | rect. | 6 | 3 |
| 843 | 139.58 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 1 | 12 |
| 853 | 139.60 | temperature | 30.0 | 720 | > th | dose dependent | sin | 4 | NA |
| 857 | 139.61 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 1 | 5 |
| 859 | 139.62 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 19 |
| 862 | 139.62 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 2 | 9 |
| 892 | 139.71 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 893 | 139.71 | wind | 7.0 | 4320 | > th | dose independent | rect. | 18 | 7 |
| 937 | 139.76 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 942 | 139.77 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 946 | 139.77 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 3 |
| 957 | 139.78 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 978 | 139.82 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 984 | 139.82 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 987 | 139.82 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 15 | 17 |
| 991 | 139.83 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 2 |