Os02g0658500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0658500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.53 | 0.324 | 10.3 | 0.842 | 0.926 | -0.963 | 0.748 | 3.55 | 0.392 | 1.96 | 15.95 | 409 | -- | -- |
| 57.02 | 0.352 | 10.4 | 0.347 | 0.93 | -1.04 | 0.689 | -- | 0.267 | 1.41 | 14.88 | 515 | -- | -- |
| 48.41 | 0.324 | 10.3 | 0.837 | 1.03 | -0.948 | -- | 3.51 | 0.382 | 1.89 | 15.33 | 586 | -- | -- |
| 57.09 | 0.352 | 10.4 | 0.216 | 0.964 | -0.942 | -- | -- | 0.225 | 1.84 | 10.4 | 490 | -- | -- |
| 82.95 | 0.424 | 10.3 | 0.763 | -- | -1.7 | -- | 2.31 | 0.442 | -- | 16.72 | 128 | -- | -- |
| 66.37 | 0.382 | 10.4 | 0.015 | 1.07 | -- | 0.493 | -- | 0.0883 | 2.67 | -- | -- | -- | -- |
| 67.22 | 0.384 | 10.4 | 0.00263 | 1.07 | -- | -- | -- | 0.0852 | 2.71 | -- | -- | -- | -- |
| 85.7 | 0.431 | 10.3 | 0.426 | -- | -1.9 | -- | -- | 0.386 | -- | 14.4 | 27 | -- | -- |
| 58.19 | 0.355 | 10.4 | -- | 0.968 | -0.849 | -- | -- | 0.191 | 1.93 | 10.64 | 469 | -- | -- |
| 134.42 | 0.542 | 10.4 | 0.0484 | -- | -- | -- | -- | 0.112 | -- | -- | -- | -- | -- |
| 67.22 | 0.384 | 10.4 | -- | 1.07 | -- | -- | -- | 0.0849 | 2.71 | -- | -- | -- | -- |
| 89.37 | 0.44 | 10.4 | -- | -- | -1.73 | -- | -- | 0.304 | -- | 13.04 | 23 | -- | -- |
| 134.48 | 0.541 | 10.4 | -- | -- | -- | -- | -- | 0.107 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.29 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 11 | 45.25 | radiation | 10 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 30 | 46.11 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 31 | 46.14 | humidity | 90 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 37 | 46.18 | humidity | 90 | 14400 | > th | dose dependent | sin | 7 | NA |
| 38 | 46.18 | humidity | 90 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 46 | 46.21 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 109 | 46.39 | humidity | 90 | 14400 | > th | dose independent | sin | 9 | NA |
| 112 | 46.39 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 10 |
| 145 | 46.49 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 19 |
| 188 | 46.62 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 6 |
| 190 | 46.62 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 215 | 46.70 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 9 |
| 234 | 46.77 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 240 | 46.79 | temperature | 15 | 720 | > th | dose dependent | sin | 5 | NA |
| 334 | 47.01 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 349 | 47.04 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 366 | 47.09 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 379 | 47.10 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 10 |
| 393 | 47.13 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 396 | 47.14 | humidity | 90 | 14400 | < th | dose independent | sin | 10 | NA |
| 463 | 47.30 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 18 |
| 483 | 47.34 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 496 | 47.36 | temperature | 25 | 720 | < th | dose dependent | sin | 5 | NA |
| 539 | 47.46 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 566 | 47.53 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 20 |
| 610 | 47.62 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 649 | 47.73 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 661 | 47.76 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 18 |
| 670 | 47.78 | radiation | 30 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 699 | 47.83 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 15 |
| 746 | 47.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 794 | 48.03 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 815 | 48.06 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 822 | 48.07 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 830 | 48.08 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 841 | 48.09 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 842 | 48.09 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 879 | 48.16 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 881 | 48.17 | wind | 3 | 43200 | < th | dose dependent | rect. | 9 | 3 |
| 882 | 48.17 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 927 | 48.25 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 928 | 48.26 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 949 | 48.30 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 969 | 48.34 | temperature | 20 | 720 | < th | dose independent | sin | 5 | NA |
| 979 | 48.35 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 997 | 48.37 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 999 | 48.38 | humidity | 90 | 14400 | > th | dose independent | rect. | 4 | 3 |