Os02g0656100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0656100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 456.02 | 1 | 3.99 | -2.48 | 0.412 | 2.9 | 1.34 | -8.52 | -0.254 | 6.87 | 19.79 | 2615 | -- | -- |
| 507.81 | 1.05 | 4.26 | -3.21 | 0.511 | 5.95 | 2.55 | -- | -0.452 | 5.92 | 18.5 | 2614 | -- | -- |
| 456.25 | 0.995 | 4.02 | -2.54 | 0.412 | 3.12 | -- | -8.3 | -0.303 | 7.27 | 19.48 | 2601 | -- | -- |
| 514.73 | 1.06 | 4.29 | -3.48 | 0.502 | 5.75 | -- | -- | -0.574 | 6.72 | 18.5 | 2639 | -- | -- |
| 464.9 | 1 | 4.03 | -2.57 | -- | 3.09 | -- | -8.23 | -0.308 | -- | 19.45 | 2555 | -- | -- |
| 961.11 | 1.45 | 4.52 | -6.12 | 0.212 | -- | 2.58 | -- | -1.59 | 5.62 | -- | -- | -- | -- |
| 969.31 | 1.46 | 4.52 | -6.1 | 0.431 | -- | -- | -- | -1.6 | 9.42 | -- | -- | -- | -- |
| 528.03 | 1.07 | 4.3 | -3.5 | -- | 5.69 | -- | -- | -0.577 | -- | 18.48 | 2614 | -- | -- |
| 588.99 | 1.13 | 4.1 | -- | 0.396 | 7.35 | -- | -- | 0.269 | 8.09 | 18.67 | 9834 | -- | -- |
| 980.19 | 1.46 | 4.53 | -6.1 | -- | -- | -- | -- | -1.6 | -- | -- | -- | -- | -- |
| 1948.92 | 2.07 | 4.36 | -- | 0.452 | -- | -- | -- | -0.919 | 10.4 | -- | -- | -- | -- |
| 568.76 | 1.11 | 4.14 | -- | -- | 8.11 | -- | -- | 0.11 | -- | 17.4 | 10830 | -- | -- |
| 1961.44 | 2.07 | 4.38 | -- | -- | -- | -- | -- | -0.92 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 445.93 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 5 |
| 3 | 449.28 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 21 | 463.19 | temperature | 20 | 4320 | < th | dose dependent | rect. | 20 | 9 |
| 41 | 465.80 | temperature | 20 | 4320 | < th | dose dependent | rect. | 22 | 3 |
| 52 | 467.20 | temperature | 20 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 92 | 471.46 | temperature | 20 | 4320 | < th | dose dependent | sin | 11 | NA |
| 116 | 473.43 | temperature | 20 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 130 | 474.35 | temperature | 20 | 4320 | < th | dose dependent | rect. | 3 | 3 |
| 169 | 478.09 | temperature | 20 | 4320 | > th | dose independent | sin | 16 | NA |
| 202 | 480.62 | temperature | 20 | 4320 | < th | dose independent | sin | 16 | NA |
| 280 | 485.63 | temperature | 25 | 4320 | < th | dose dependent | sin | 16 | NA |
| 321 | 486.81 | temperature | 25 | 4320 | < th | dose dependent | rect. | 9 | 19 |
| 429 | 490.12 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 22 |
| 448 | 490.43 | temperature | 25 | 4320 | < th | dose dependent | rect. | 12 | 23 |
| 454 | 490.59 | temperature | 20 | 4320 | > th | dose independent | rect. | 8 | 19 |
| 459 | 490.61 | temperature | 25 | 4320 | < th | dose dependent | no | NA | NA |
| 473 | 490.89 | temperature | 20 | 4320 | > th | dose independent | rect. | 6 | 20 |
| 499 | 491.36 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 23 |
| 501 | 491.41 | humidity | 50 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 512 | 491.55 | humidity | 50 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 533 | 491.87 | temperature | 20 | 4320 | < th | dose independent | rect. | 5 | 21 |
| 574 | 492.59 | temperature | 20 | 4320 | < th | dose independent | rect. | 8 | 19 |
| 624 | 493.73 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 16 |
| 625 | 493.78 | temperature | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 630 | 493.90 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 16 |
| 631 | 493.92 | radiation | 1 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 642 | 494.09 | humidity | 80 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 648 | 494.17 | humidity | 80 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 651 | 494.22 | radiation | 1 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 653 | 494.22 | radiation | 1 | 14400 | < th | dose dependent | rect. | 10 | 2 |
| 658 | 494.31 | temperature | 20 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 659 | 494.31 | humidity | 60 | 43200 | < th | dose dependent | rect. | 19 | 14 |
| 671 | 494.55 | temperature | 10 | 4320 | > th | dose dependent | rect. | 19 | 4 |
| 691 | 494.75 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 710 | 495.04 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 20 |
| 720 | 495.22 | temperature | 20 | 4320 | < th | dose independent | rect. | 12 | 22 |
| 728 | 495.33 | humidity | 60 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 738 | 495.49 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 14 |
| 785 | 496.02 | humidity | 80 | 43200 | > th | dose independent | rect. | 24 | 9 |
| 792 | 496.10 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 19 |
| 800 | 496.15 | temperature | 20 | 4320 | > th | dose independent | rect. | 12 | 23 |
| 850 | 496.71 | humidity | 60 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 905 | 497.30 | wind | 5 | 43200 | > th | dose dependent | rect. | 22 | 2 |
| 909 | 497.35 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 7 |
| 914 | 497.38 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 22 |
| 916 | 497.40 | humidity | 60 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 933 | 497.56 | humidity | 60 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 979 | 498.00 | humidity | 60 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 989 | 498.07 | wind | 7 | 43200 | > th | dose dependent | rect. | 16 | 20 |