Os02g0655500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF862, eukaryotic domain containing protein.
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Os02g0655500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF862, eukaryotic domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 127.45 | 0.53 | 5.51 | -0.405 | 0.409 | 0.304 | 1.01 | -3.66 | -0.511 | 9.63 | 19.78 | 5916 | -- | -- |
| 135.65 | 0.542 | 5.63 | -0.584 | 0.348 | 1.32 | 1.2 | -- | -0.567 | 9.76 | 19 | 11926 | -- | -- |
| 131.01 | 0.533 | 5.51 | -0.408 | 0.406 | 0.346 | -- | -3.56 | -0.496 | 9.76 | 19.9 | 5918 | -- | -- |
| 131.28 | 0.534 | 5.67 | -0.444 | 0.404 | 1.66 | -- | -- | -0.629 | 9.68 | 16.7 | 12989 | -- | -- |
| 140.58 | 0.552 | 5.52 | -0.334 | -- | 0.341 | -- | -3.66 | -0.491 | -- | 19.9 | 5922 | -- | -- |
| 164.98 | 0.602 | 5.74 | -1.61 | 0.4 | -- | 1.14 | -- | -0.937 | 9.62 | -- | -- | -- | -- |
| 169.77 | 0.61 | 5.73 | -1.56 | 0.393 | -- | -- | -- | -0.935 | 9.88 | -- | -- | -- | -- |
| 140.19 | 0.551 | 5.66 | -0.284 | -- | 1.83 | -- | -- | -0.561 | -- | 16.71 | 13018 | -- | -- |
| 131.68 | 0.534 | 5.64 | -- | 0.393 | 2.03 | -- | -- | -0.498 | 9.88 | 16.88 | 13093 | -- | -- |
| 179.02 | 0.625 | 5.75 | -1.57 | -- | -- | -- | -- | -0.935 | -- | -- | -- | -- | -- |
| 234.1 | 0.716 | 5.7 | -- | 0.399 | -- | -- | -- | -0.761 | 10.2 | -- | -- | -- | -- |
| 141.13 | 0.553 | 5.65 | -- | -- | 2.03 | -- | -- | -0.496 | -- | 16.9 | 13050 | -- | -- |
| 243.76 | 0.729 | 5.71 | -- | -- | -- | -- | -- | -0.761 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 122.38 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 2 | 122.68 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 3 | 5 |
| 3 | 122.74 | wind | 7.0 | 14400 | > th | dose independent | rect. | 3 | 3 |
| 5 | 122.87 | wind | 5.0 | 14400 | < th | dose independent | rect. | 8 | 4 |
| 8 | 123.07 | wind | 7.0 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 9 | 123.08 | wind | 5.0 | 14400 | > th | dose independent | rect. | 8 | 4 |
| 11 | 123.24 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 7 | 5 |
| 14 | 123.29 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 19 | 123.34 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 32 | 123.54 | wind | 5.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 40 | 123.67 | wind | 5.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 58 | 123.87 | wind | 5.0 | 14400 | > th | dose independent | rect. | 24 | 15 |
| 60 | 123.88 | wind | 5.0 | 14400 | > th | dose independent | rect. | 22 | 17 |
| 61 | 123.90 | wind | 5.0 | 14400 | < th | dose independent | rect. | 24 | 15 |
| 63 | 123.91 | wind | 5.0 | 14400 | < th | dose independent | rect. | 22 | 17 |
| 75 | 124.01 | wind | 5.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 77 | 124.03 | wind | 5.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 105 | 124.22 | wind | 5.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 140 | 124.39 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 162 | 124.50 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 24 | 5 |
| 168 | 124.53 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 182 | 124.58 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 8 | 3 |
| 196 | 124.62 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 200 | 124.64 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 1 | 9 |
| 209 | 124.69 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 21 |
| 230 | 124.78 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 231 | 124.78 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 6 | 6 |
| 232 | 124.78 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 4 | 8 |
| 238 | 124.80 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 262 | 124.89 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 280 | 124.95 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 12 |
| 290 | 124.98 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 24 | 12 |
| 296 | 124.99 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 2 | 10 |
| 298 | 124.99 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 7 | 14 |
| 299 | 125.00 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 309 | 125.03 | wind | 1.0 | 43200 | > th | dose independent | rect. | 11 | 19 |
| 346 | 125.12 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 362 | 125.15 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 375 | 125.17 | wind | 3.0 | 14400 | > th | dose dependent | sin | 6 | NA |
| 376 | 125.17 | wind | 9.0 | 14400 | < th | dose dependent | sin | 6 | NA |
| 385 | 125.18 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 24 | 7 |
| 443 | 125.28 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 12 |
| 458 | 125.31 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 474 | 125.35 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 492 | 125.40 | wind | 1.0 | 43200 | > th | dose independent | rect. | 17 | 23 |
| 499 | 125.42 | wind | 1.0 | 43200 | > th | dose independent | rect. | 16 | 21 |
| 501 | 125.42 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 19 | 14 |
| 535 | 125.50 | wind | 9.0 | 14400 | > th | dose independent | rect. | 22 | 13 |
| 561 | 125.53 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 17 | 15 |
| 598 | 125.60 | wind | 1.0 | 43200 | < th | dose independent | rect. | 10 | 20 |
| 613 | 125.62 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 640 | 125.66 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 3 | 7 |
| 656 | 125.68 | wind | 1.0 | 43200 | > th | dose independent | rect. | 14 | 23 |
| 662 | 125.69 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 696 | 125.75 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 22 |
| 710 | 125.77 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 24 | 8 |
| 722 | 125.78 | wind | 5.0 | 14400 | > th | dose independent | rect. | 14 | 22 |
| 742 | 125.81 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 744 | 125.81 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 10 | 9 |
| 759 | 125.82 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 22 |
| 762 | 125.83 | wind | 5.0 | 14400 | < th | dose independent | rect. | 16 | 20 |
| 770 | 125.84 | wind | 5.0 | 14400 | > th | dose independent | rect. | 16 | 20 |
| 790 | 125.86 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 22 | 9 |
| 816 | 125.89 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 23 |
| 823 | 125.90 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 832 | 125.91 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 24 | 7 |
| 904 | 126.00 | humidity | 60.0 | 43200 | > th | dose dependent | sin | 8 | NA |
| 990 | 126.09 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 992 | 126.09 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 21 |
| 994 | 126.09 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |