Os02g0654500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0654500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.82 | 0.204 | 12.1 | -0.48 | 0.346 | -1.06 | -0.0336 | -0.164 | -0.251 | 17.1 | 29.74 | 104 | -- | -- |
| 18.84 | 0.202 | 12.1 | -0.496 | 0.347 | -1.06 | 0.0318 | -- | -0.258 | 17 | 29.82 | 113 | -- | -- |
| 18.81 | 0.202 | 12.1 | -0.481 | 0.342 | -1.07 | -- | -0.161 | -0.252 | 17.1 | 29.74 | 110 | -- | -- |
| 18.83 | 0.202 | 12.1 | -0.505 | 0.343 | -1.06 | -- | -- | -0.256 | 17 | 29.84 | 113 | -- | -- |
| 23.16 | 0.224 | 12.1 | -0.517 | -- | -1.35 | -- | -0.249 | -0.297 | -- | 30.54 | 155 | -- | -- |
| 33.74 | 0.272 | 12.1 | -0.246 | 0.666 | -- | 0.124 | -- | -0.05 | 16.1 | -- | -- | -- | -- |
| 33.78 | 0.272 | 12.1 | -0.245 | 0.667 | -- | -- | -- | -0.0493 | 16.1 | -- | -- | -- | -- |
| 23.22 | 0.224 | 12.1 | -0.582 | -- | -1.38 | -- | -- | -0.293 | -- | 30.92 | 136 | -- | -- |
| 24.88 | 0.234 | 12.1 | -- | 0.441 | -0.994 | -- | -- | -0.14 | 17.2 | 49.17 | 41 | -- | -- |
| 57.97 | 0.356 | 12.1 | -0.272 | -- | -- | -- | -- | -0.067 | -- | -- | -- | -- | -- |
| 35.36 | 0.278 | 12 | -- | 0.672 | -- | -- | -- | -0.022 | 16.1 | -- | -- | -- | -- |
| 32 | 0.263 | 12.1 | -- | -- | -1.35 | -- | -- | -0.184 | -- | 40.53 | 122 | -- | -- |
| 59.93 | 0.361 | 12 | -- | -- | -- | -- | -- | -0.0369 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.53 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 4 | 18.24 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 10 | 18.42 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 22 |
| 14 | 18.55 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 17 | 18.62 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 19 | 18.67 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 22 |
| 23 | 18.70 | temperature | 10 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 30 | 18.85 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 32 | 18.90 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 44 | 19.05 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 48 | 19.10 | temperature | 15 | 90 | > th | dose dependent | sin | 6 | NA |
| 53 | 19.15 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 69 | 19.29 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 82 | 19.34 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 89 | 19.40 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 95 | 19.44 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 116 | 19.60 | temperature | 30 | 90 | < th | dose dependent | sin | 6 | NA |
| 149 | 19.84 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 18 |
| 168 | 19.95 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 17 |
| 170 | 19.95 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 173 | 19.96 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 182 | 20.02 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 194 | 20.10 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 288 | 20.52 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 366 | 20.86 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 394 | 20.98 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 448 | 21.15 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 5 |
| 463 | 21.19 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 472 | 21.22 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 6 |
| 498 | 21.27 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 534 | 21.33 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 572 | 21.40 | temperature | 10 | 4320 | > th | dose dependent | rect. | 18 | 8 |
| 587 | 21.42 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 5 |
| 627 | 21.45 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 630 | 21.46 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 755 | 21.59 | temperature | 30 | 4320 | < th | dose dependent | sin | 14 | NA |
| 806 | 21.62 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 867 | 21.69 | temperature | 10 | 4320 | > th | dose dependent | sin | 14 | NA |
| 876 | 21.70 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 2 |