BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0654500 Os02g0654500|AK066320
         (229 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G17510.1  | chr4:9767114-9768648 REVERSE LENGTH=235            291   1e-79
AT1G65650.1  | chr1:24415172-24417466 REVERSE LENGTH=331           59   2e-09
AT5G16310.1  | chr5:5342579-5344153 REVERSE LENGTH=335             58   4e-09

>AT4G17510.1 | chr4:9767114-9768648 REVERSE LENGTH=235
          Length = 234

 Score =  291 bits (746), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 136/225 (60%), Positives = 170/225 (75%), Gaps = 3/225 (1%)

Query: 3   KRWIPLEANPDVMNQFMWGLGVAEGEAQFCDVYGLDDELLAMVPQPVLAVLFLYPLTSLX 62
           KRW+PLE+NPDVMNQ++WGLG+A  EA+  DVYGLDDELL MVP+PVLAVLFLYP+T   
Sbjct: 11  KRWLPLESNPDVMNQYLWGLGLAPDEAECNDVYGLDDELLEMVPKPVLAVLFLYPITK-- 68

Query: 63  XXXXXXXXXXXXXXXXKDLSKRVYFTKQTVGNACGTVGVIHAIGNAASKLKLVEGSYFDR 122
                           K  S +VYF KQTVGNACGT+G++HAIGN  S++KL +GS+ DR
Sbjct: 69  -KSEEERIEQDKEIKEKVHSDKVYFMKQTVGNACGTIGLLHAIGNITSEIKLSDGSFLDR 127

Query: 123 FYKQTVDMDPVQRAAFLEEDDEMEDAHSVAASAGDTDANVEVNEHFVCFSCVDGELYELD 182
           F+K T +M P++RA FLE D ++EDAHSVA  AGDT A+ + + HF+C +CV+GELYELD
Sbjct: 128 FFKSTANMTPMERAKFLENDSQIEDAHSVAVIAGDTPASEDADTHFICLACVEGELYELD 187

Query: 183 GRKSQPICHGPSSPDTLLQDAAKVIKARIASNPDSMNFNVMALSK 227
           GRK+ PI HG SSP TLL+DA KVIK  I  NP S+NFN++A+SK
Sbjct: 188 GRKAGPISHGASSPATLLKDATKVIKKMIEKNPGSLNFNLIAISK 232



>AT1G65650.1 | chr1:24415172-24417466 REVERSE LENGTH=331
          Length = 330

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 97/238 (40%), Gaps = 33/238 (13%)

Query: 5   WIPLEANPDVMNQFMWGLGVAEGEAQFCDVYGLDDELLAMVPQPVLAVLFLYPLTSLXXX 64
           W  +E++P V  + +  + V     Q  ++Y LD + L  + +PV  ++FL+   +    
Sbjct: 3   WCTIESDPGVFTELIQQMQVKG--VQVEELYSLDSDSLNNL-RPVYGLIFLFKWQA---- 55

Query: 65  XXXXXXXXXXXXXXKDLSKRVYFTKQTVGNACGTVGVIHAIGNAASKLKLVEGSYFDRFY 124
                         +D    ++F  Q + NAC T  ++  + N+       E S    F 
Sbjct: 56  -----GEKDERPTIQDQVSNLFFANQVINNACATQAILAILLNSPEVDIGPELSALKEFT 110

Query: 125 KQTVDMDPVQRAAFLEEDDEMEDAHSVAA----------SAGDTDANVEVNEHFVCFSCV 174
           K   +     +   +   D +  AH+  A           A   D +V    HF+ +  V
Sbjct: 111 K---NFPSDLKGLAINNSDSIRAAHNSFARPEPFVPEEQKAATKDDDVY---HFISYIPV 164

Query: 175 DGELYELDGRKSQPICHGPSSPDTL----LQDAAKVIKARIASNPDS-MNFNVMALSK 227
           DG LYELDG K  PI  GP   D      LQ    VI+ RI     S + FN++A+ K
Sbjct: 165 DGVLYELDGLKEGPISLGPCPGDQTGIEWLQMVQPVIQERIERYSQSEIRFNLLAVIK 222



>AT5G16310.1 | chr5:5342579-5344153 REVERSE LENGTH=335
          Length = 334

 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 103/241 (42%), Gaps = 33/241 (13%)

Query: 5   WIPLEANPDVMNQFMWGLGVAEGEAQFCDVYGLDDELLAMVPQPVLAVLFLYPLTSLXXX 64
           W+P+E++P +  + +  + V     Q  ++Y LD   L  + +PV  ++ LY        
Sbjct: 3   WLPVESDPGIFTEIIQQMQVKG--VQVEELYSLDFNSLDEI-RPVYGLILLYKWRP---- 55

Query: 65  XXXXXXXXXXXXXXKDLSKRVYFTKQTVGNACGTVGVIHAIGNAASKLKLVEGSYFDRFY 124
                          + +   +F  Q + NAC T  ++  + N++S     E S   +F 
Sbjct: 56  -----EEKENRVVITEPNPNFFFASQIINNACATQAILSVLMNSSSIDIGSELSELKQFA 110

Query: 125 KQ--------TVDMDPVQRAA---FLEEDDE--MEDAHSVAASAGDTDANVEVNEHFVCF 171
           K+         ++ +   RAA   F   D    MED    AA   D D +V    H++ +
Sbjct: 111 KEFPPELKGLAINNNEAIRAAHNTFARPDPSSIMEDEELAAAKNLDEDDDVY---HYISY 167

Query: 172 SCVDGELYELDGRKSQPI----CHGPSSPDTLLQDAAKVIKARI-ASNPDSMNFNVMALS 226
             VDG LYELDG K  PI    C G       L+    V++ +I   + + + F+++A+ 
Sbjct: 168 LPVDGILYELDGLKEGPISLGQCLGEPEGIEWLRMVQPVVQEQIDRYSQNEIRFSLLAVV 227

Query: 227 K 227
           K
Sbjct: 228 K 228



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,599,357
Number of extensions: 171763
Number of successful extensions: 443
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 443
Number of HSP's successfully gapped: 3
Length of query: 229
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 134
Effective length of database: 8,502,049
Effective search space: 1139274566
Effective search space used: 1139274566
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 110 (47.0 bits)