Os02g0646200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, B-box domain containing protein.
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Os02g0646200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, B-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 415.97 | 0.958 | 8.63 | -1.52 | 6.08 | 4.2 | -0.329 | 1.95 | 0.359 | 22 | 9.423 | 30 | 22.7 | -- |
| 422.49 | 0.957 | 8.64 | -1.54 | 6.17 | 4.18 | 0.098 | -- | 0.342 | 22.2 | 8.969 | 29 | 22.3 | -- |
| 415.65 | 0.95 | 8.63 | -1.49 | 6.12 | 4.19 | -- | 1.84 | 0.36 | 22.1 | 8.97 | 29 | 22.4 | -- |
| 422.43 | 0.957 | 8.64 | -1.55 | 6.15 | 4.24 | -- | -- | 0.354 | 22.1 | 8.928 | 29 | 22.3 | -- |
| 737.19 | 1.27 | 8.52 | -1.4 | -- | 6.53 | -- | 0.752 | 0.185 | -- | 19.37 | 13 | 5.72 | -- |
| 705.9 | 1.25 | 8.67 | -1.39 | 7.01 | -- | 0.783 | -- | 0.117 | 23.7 | -- | -- | -- | -- |
| 708.54 | 1.25 | 8.67 | -1.42 | 7.01 | -- | -- | -- | 0.114 | 23.7 | -- | -- | -- | -- |
| 706.45 | 1.24 | 8.53 | -1.43 | -- | 6.92 | -- | -- | 0.132 | -- | 136 | 6 | 6.25 | -- |
| 483.15 | 1.02 | 8.59 | -- | 6.14 | 4.08 | -- | -- | 0.541 | 22.3 | 6.349 | 36 | 22 | -- |
| 3800.76 | 2.88 | 8.51 | -1.22 | -- | -- | -- | -- | 0.2 | -- | -- | -- | -- | -- |
| 761.96 | 1.29 | 8.64 | -- | 6.99 | -- | -- | -- | 0.272 | 23.7 | -- | -- | -- | -- |
| 759.14 | 1.28 | 8.49 | -- | -- | 6.9 | -- | -- | 0.292 | -- | 119.5 | 4 | 6.25 | -- |
| 3840.06 | 2.89 | 8.48 | -- | -- | -- | -- | -- | 0.335 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 417.69 | radiation | 10.0 | 30 | < th | dose dependent | sin | 5 | NA |
| 6 | 431.82 | radiation | 1.0 | 90 | > th | dose independent | sin | 5 | NA |
| 8 | 439.06 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 15 |
| 12 | 440.70 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 1 | 13 |
| 15 | 440.87 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 6 |
| 18 | 442.24 | radiation | 1.0 | 90 | < th | dose independent | sin | 5 | NA |
| 39 | 447.53 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 19 |
| 43 | 448.65 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 1 | 5 |
| 45 | 448.91 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 23 | 5 |
| 49 | 449.57 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 19 |
| 50 | 449.57 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 19 |
| 63 | 451.92 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 5 |
| 65 | 452.23 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 5 |
| 67 | 452.36 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 5 |
| 68 | 452.36 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 5 |
| 71 | 452.36 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 5 |
| 72 | 452.36 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 5 |
| 77 | 452.36 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 19 |
| 78 | 452.36 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 5 |
| 83 | 452.49 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 5 |
| 86 | 453.09 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 7 |
| 87 | 453.09 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 7 |
| 96 | 456.37 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 7 |
| 97 | 456.37 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 7 |
| 98 | 456.37 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 7 |
| 99 | 456.37 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 17 |
| 101 | 456.40 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 7 |
| 109 | 457.73 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 5 |
| 110 | 457.73 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 5 |
| 112 | 457.95 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 21 |
| 114 | 458.25 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 7 |
| 120 | 460.69 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 24 | 3 |
| 123 | 460.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 21 |
| 124 | 460.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 21 |
| 155 | 462.13 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 7 |
| 158 | 462.45 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 16 |
| 166 | 462.83 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 16 |
| 168 | 462.89 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 11 | 17 |
| 172 | 463.65 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 174 | 463.68 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 3 |
| 176 | 463.69 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 177 | 463.69 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 3 |
| 180 | 463.69 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 3 |
| 181 | 463.69 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 186 | 463.69 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 21 |
| 187 | 463.69 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 24 | 3 |
| 192 | 463.83 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 195 | 464.17 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 3 |
| 196 | 464.17 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 3 |
| 206 | 465.30 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 5 |
| 209 | 465.50 | wind | 9.0 | 270 | < th | dose dependent | rect. | 23 | 5 |
| 215 | 465.87 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 10 |
| 227 | 466.22 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 10 |
| 272 | 468.08 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 17 |
| 274 | 468.11 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 22 | 7 |
| 278 | 468.33 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 17 |
| 279 | 468.33 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 17 |
| 289 | 468.91 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 3 |
| 325 | 470.67 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 16 |
| 414 | 473.45 | radiation | 30.0 | 270 | < th | dose independent | rect. | 15 | 9 |
| 416 | 473.75 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 15 |
| 426 | 474.34 | wind | 9.0 | 270 | < th | dose dependent | rect. | 24 | 3 |
| 431 | 474.74 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 9 |
| 442 | 475.56 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 15 |
| 444 | 475.56 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 15 |
| 448 | 475.96 | wind | 1.0 | 270 | > th | dose independent | rect. | 16 | 8 |
| 454 | 476.30 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 9 |
| 493 | 478.21 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 15 |
| 495 | 478.29 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 9 |
| 496 | 478.29 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 15 |
| 526 | 479.90 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 15 |
| 539 | 480.18 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 7 |
| 552 | 481.09 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 17 |
| 553 | 481.18 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 1 | 5 |
| 594 | 482.18 | radiation | 1.0 | 270 | < th | dose independent | sin | 9 | NA |
| 595 | 482.20 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 15 |
| 599 | 482.29 | humidity | 60.0 | 270 | > th | dose independent | rect. | 18 | 15 |
| 601 | 482.35 | wind | 1.0 | 270 | > th | dose independent | rect. | 9 | 9 |
| 613 | 482.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 9 |
| 614 | 482.80 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 9 | 9 |
| 615 | 482.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 15 |
| 634 | 483.37 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 19 |
| 645 | 484.00 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 9 |
| 650 | 484.10 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 15 |
| 653 | 484.27 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 9 |
| 654 | 484.27 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 9 |
| 657 | 484.42 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 15 |
| 697 | 485.60 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 19 |
| 708 | 486.15 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 15 |
| 751 | 486.77 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 19 |
| 779 | 487.25 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 9 |
| 780 | 487.25 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 9 |
| 815 | 488.75 | wind | 9.0 | 10 | < th | dose independent | rect. | 1 | 5 |
| 816 | 488.75 | temperature | 10.0 | 10 | > th | dose independent | rect. | 1 | 5 |
| 818 | 488.75 | temperature | 30.0 | 10 | < th | dose independent | rect. | 1 | 5 |
| 819 | 488.75 | humidity | 50.0 | 10 | > th | dose independent | rect. | 1 | 5 |
| 822 | 488.75 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 1 | 5 |
| 823 | 488.75 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 1 | 5 |
| 828 | 488.75 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 19 |
| 885 | 490.94 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 15 |
| 886 | 490.94 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 15 |
| 892 | 491.08 | wind | 9.0 | 1440 | < th | dose independent | rect. | 2 | 5 |
| 893 | 491.08 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 5 |
| 896 | 491.08 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 5 |
| 900 | 491.08 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 2 | 5 |
| 905 | 491.08 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 2 | 5 |
| 906 | 491.08 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 2 | 5 |
| 910 | 491.08 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 19 |
| 929 | 491.53 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 9 | 9 |
| 944 | 491.88 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 17 |
| 968 | 492.21 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 19 |
| 975 | 492.48 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 19 |
| 976 | 492.48 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 19 |