BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0646200 Os02g0646200|AK071507
(269 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G75540.1 | chr1:28366059-28367398 FORWARD LENGTH=332 130 9e-31
AT4G39070.1 | chr4:18205061-18206421 REVERSE LENGTH=243 122 1e-28
AT1G78600.2 | chr1:29567370-29568662 FORWARD LENGTH=320 102 1e-22
AT1G06040.1 | chr1:1828662-1829659 REVERSE LENGTH=249 97 9e-21
AT2G31380.1 | chr2:13382150-13383302 FORWARD LENGTH=239 90 1e-18
AT4G10240.1 | chr4:6368967-6369526 REVERSE LENGTH=163 87 7e-18
AT2G21320.1 | chr2:9126502-9127652 FORWARD LENGTH=173 72 4e-13
AT4G38960.3 | chr4:18161576-18163045 FORWARD LENGTH=227 58 5e-09
AT2G24790.1 | chr2:10566959-10567946 FORWARD LENGTH=295 55 3e-08
AT4G15250.1 | chr4:8709942-8711106 REVERSE LENGTH=331 52 3e-07
AT3G07650.1 | chr3:2442494-2443901 FORWARD LENGTH=373 52 3e-07
AT5G48250.1 | chr5:19561719-19563113 REVERSE LENGTH=374 52 3e-07
AT5G15850.1 | chr5:5176297-5177473 REVERSE LENGTH=356 52 4e-07
AT5G24930.1 | chr5:8589325-8590949 FORWARD LENGTH=407 52 4e-07
AT3G02380.1 | chr3:487438-488624 REVERSE LENGTH=348 50 1e-06
AT2G47890.1 | chr2:19608245-19609476 FORWARD LENGTH=333 49 2e-06
AT3G21880.1 | chr3:7706748-7708093 FORWARD LENGTH=365 49 4e-06
AT5G15840.1 | chr5:5171343-5172697 REVERSE LENGTH=374 49 4e-06
>AT1G75540.1 | chr1:28366059-28367398 FORWARD LENGTH=332
Length = 331
Score = 130 bits (326), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 79/112 (70%), Gaps = 5/112 (4%)
Query: 1 MKVQCDVCAAEAASVFXXXXXXXXXXXXXHRVHRANKLAGKHRRFSLLNPSASGRSPTST 60
MK++CDVC E ASVF H+VH ANKLA KH RFSLL PS+S +T
Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSS-----NT 55
Query: 61 TAPLCDICQEKRGFLFCKEDRAILCRECDVPVHTASELTMRHSRYLLTGVRL 112
++PLCDICQ+K+ LFC++DRAILC++CD +H A+E T +H R+LLTGV+L
Sbjct: 56 SSPLCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKL 107
>AT4G39070.1 | chr4:18205061-18206421 REVERSE LENGTH=243
Length = 242
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 73/112 (65%), Gaps = 7/112 (6%)
Query: 1 MKVQCDVCAAEAASVFXXXXXXXXXXXXXHRVHRANKLAGKHRRFSLLNPSASGRSPTST 60
MK+ C VC E ASVF VH ANKLAGKH RFSL SPT
Sbjct: 1 MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLT-------SPTFK 53
Query: 61 TAPLCDICQEKRGFLFCKEDRAILCRECDVPVHTASELTMRHSRYLLTGVRL 112
APLCDIC E+R LFC+EDRAILCRECD+P+H A+E T +H+R+LLTGV++
Sbjct: 54 DAPLCDICGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKI 105
>AT1G78600.2 | chr1:29567370-29568662 FORWARD LENGTH=320
Length = 319
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 68/112 (60%), Gaps = 8/112 (7%)
Query: 1 MKVQCDVCAAEAASVFXXXXXXXXXXXXXHRVHRANKLAGKHRRFSLLNPSASGRSPTST 60
MK+QC+VC A A+V ++H ANKLAGKH+R L S +++
Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPL--------SASAS 52
Query: 61 TAPLCDICQEKRGFLFCKEDRAILCRECDVPVHTASELTMRHSRYLLTGVRL 112
+ P CDICQE GF FC +DRA+LCR+CDV +HT + H R+LLTG+++
Sbjct: 53 SIPKCDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKV 104
>AT1G06040.1 | chr1:1828662-1829659 REVERSE LENGTH=249
Length = 248
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 1 MKVQCDVCAAEAASVFXXXXXXXXXXXXXHRVHRANKLAGKHRRFSLLNPSASGRSPTST 60
MK+QCDVC A+V +H ANKLA KH+R L + ST
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHL--------NSLST 52
Query: 61 TAPLCDICQEKRGFLFCKEDRAILCRECDVPVHTASELTMRHSRYLLTGVRL 112
P CDICQEK F+FC EDRA+LCR+CD +H A+ + H R+L TG+++
Sbjct: 53 KFPRCDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKV 104
>AT2G31380.1 | chr2:13382150-13383302 FORWARD LENGTH=239
Length = 238
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 1 MKVQCDVCAAEAASVFXXXXXXXXXXXXXHRVHRANKLAGKHRRFSLLNPSASGRSPTST 60
MK+QCDVC A++ VH ANKLA KH+R L ST
Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFL--------DSLST 52
Query: 61 TAPLCDICQEKRGFLFCKEDRAILCRECDVPVHTASELTMRHSRYLLTGVRL 112
P CDIC EK F+FC EDRA+LCR+CD H + + H R+L TG+R+
Sbjct: 53 KFPPCDICLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRV 104
>AT4G10240.1 | chr4:6368967-6369526 REVERSE LENGTH=163
Length = 162
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 67/112 (59%), Gaps = 6/112 (5%)
Query: 1 MKVQCDVCAAEAASVFXXXXXXXXXXXXXHRVHRANKLAGKHRRFSLLNPSASGRSPTST 60
MK+QC+VC A V +VH ANKL +H R +L +AS T++
Sbjct: 1 MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASAT--TAS 58
Query: 61 TAPLCDICQEKRGFLFCKEDRAILCRECDVPVHTASELTMRHSRYLLTGVRL 112
APLCDICQE++G+ FC EDRA+LC +CD +HT + H R+LL+GV++
Sbjct: 59 GAPLCDICQERKGYFFCLEDRAMLCNDCDEAIHTCN----SHQRFLLSGVQV 106
>AT2G21320.1 | chr2:9126502-9127652 FORWARD LENGTH=173
Length = 172
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 1 MKVQCDVCAAEAASVFXXXXXXXXXXXXXHRVHRANKLAGKHRRFSLLNPSASGRSPTST 60
M++ CD C + AA VF +VH+ NKLA +H R L +PS
Sbjct: 1 MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPS--------- 51
Query: 61 TAPLCDICQEKRGFLFCKEDRAILCRECDVPVHTASELTMRHSRYLLTGVRL 112
AP CDIC+ F +C+ D + LC +CD+ VH + T H R+LL R+
Sbjct: 52 NAPSCDICENAPAFFYCEIDGSSLCLQCDMVVHVGGKRT--HRRFLLLRQRI 101
>AT4G38960.3 | chr4:18161576-18163045 FORWARD LENGTH=227
Length = 226
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Query: 32 VHRANKLAGKHRRFSLLNPSASGRSPTSTTAPLCDICQEKRGFLFCKEDRAILCRECDVP 91
VH NKLA +H R L PS AP CDIC+ F +C+ D + LC +CD+
Sbjct: 75 VHMCNKLASRHVRVGLAEPS---------NAPCCDICENAPAFFYCEIDGSSLCLQCDMV 125
Query: 92 VHTASELTMRHSRYLLTGVRL 112
VH + T H R+LL R+
Sbjct: 126 VHVGGKRT--HGRFLLLRQRI 144
>AT2G24790.1 | chr2:10566959-10567946 FORWARD LENGTH=295
Length = 294
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 17/104 (16%)
Query: 5 CDVCAAEAASVFXXXXXXXXXXXXXHRVHRANKLAGKHRRFSLLNPSASGRSPTSTTAPL 64
CD C + AA++F ++H ANKLA +H R L
Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL----------------- 50
Query: 65 CDICQEKRGFLFCKEDRAILCRECDVPVHTASELTMRHSRYLLT 108
C++C++ + CK D A LC CD +H+A+ L+ RH R +T
Sbjct: 51 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPIT 94
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 59 STTAPLCDICQEKRGFLFCKEDRAILCRECDVPVHTASELTMRHSRYLLTGV 110
++++ LCD C+ LFC+ D A LC +CD +HTA++L RH R L V
Sbjct: 2 ASSSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEV 53
>AT4G15250.1 | chr4:8709942-8711106 REVERSE LENGTH=331
Length = 330
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 65 CDICQEKRGFLFCKEDRAILCRECDVPVHTASELTMRHSRYLL 107
CD C ++ ++CK D A LC CDV VH+A+ L+ RH+R LL
Sbjct: 5 CDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLL 47
>AT3G07650.1 | chr3:2442494-2443901 FORWARD LENGTH=373
Length = 372
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 64 LCDICQEKRGFLFCKEDRAILCRECDVPVHTASELTMRHSRYLL 107
+CD C E+R ++C+ D A LC CD VH+A+ L+ RHSR L+
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV 47
>AT5G48250.1 | chr5:19561719-19563113 REVERSE LENGTH=374
Length = 373
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 64 LCDICQEKRGFLFCKEDRAILCRECDVPVHTASELTMRHSRYLL 107
+CD C E+R ++C+ D A LC CD VH+A+ L+ RHSR L+
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLV 47
>AT5G15850.1 | chr5:5176297-5177473 REVERSE LENGTH=356
Length = 355
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 17/100 (17%)
Query: 5 CDVCAAEAASVFXXXXXXXXXXXXXHRVHRANKLAGKHRRFSLLNPSASGRSPTSTTAPL 64
CD C + A +V+ +VH AN+LA +H R +
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRV----------------- 54
Query: 65 CDICQEKRGFLFCKEDRAILCRECDVPVHTASELTMRHSR 104
C C+ FCK D A LC CD +H+A+ L RH R
Sbjct: 55 CQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQR 94
>AT5G24930.1 | chr5:8589325-8590949 FORWARD LENGTH=407
Length = 406
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 17/104 (16%)
Query: 5 CDVCAAEAASVFXXXXXXXXXXXXXHRVHRANKLAGKHRRFSLLNPSASGRSPTSTTAPL 64
CD C + A+++ +VH ANKLA +H R +
Sbjct: 50 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWM----------------- 92
Query: 65 CDICQEKRGFLFCKEDRAILCRECDVPVHTASELTMRHSRYLLT 108
C++C++ + CK D A LC CD +H+A+ L RH R +T
Sbjct: 93 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVT 136
>AT3G02380.1 | chr3:487438-488624 REVERSE LENGTH=348
Length = 347
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 17/100 (17%)
Query: 5 CDVCAAEAASVFXXXXXXXXXXXXXHRVHRANKLAGKHRRFSLLNPSASGRSPTSTTAPL 64
CD C + A +V+ RVH AN++A +H R +
Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRV----------------- 58
Query: 65 CDICQEKRGFLFCKEDRAILCRECDVPVHTASELTMRHSR 104
C C+ CK D A LC CD +H+A+ L RH R
Sbjct: 59 CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQR 98
>AT2G47890.1 | chr2:19608245-19609476 FORWARD LENGTH=333
Length = 332
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 45/106 (42%), Gaps = 19/106 (17%)
Query: 5 CDVCAAEAASVFXXXXXXXXXXXXXHRVHRANKLAGKHRRFSLLNPSASGRSPTSTTAPL 64
CD C + A V+ +VH AN+L KH R + L
Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFR-----------------SLL 55
Query: 65 CDICQEKRGFLFCKEDRAILCRECDVPVHTASELTMRHSRYLLTGV 110
CD C E LFC+ +R++LC+ CD HTAS + HSR G
Sbjct: 56 CDSCNESPSSLFCETERSVLCQNCDWQHHTAS--SSLHSRRPFEGF 99
>AT3G21880.1 | chr3:7706748-7708093 FORWARD LENGTH=365
Length = 364
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 63 PLCDICQEKRGFLFCKEDRAILCRECDVPVHTASELTMRHSRYLL 107
P CD C + ++CK D A LC CDV VH+A+ L+ RH R L+
Sbjct: 3 PKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLI 47
>AT5G15840.1 | chr5:5171343-5172697 REVERSE LENGTH=374
Length = 373
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 17/100 (17%)
Query: 5 CDVCAAEAASVFXXXXXXXXXXXXXHRVHRANKLAGKHRRFSLLNPSASGRSPTSTTAPL 64
CD C + A +V+ +VH AN++A +H+R +
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV----------------- 62
Query: 65 CDICQEKRGFLFCKEDRAILCRECDVPVHTASELTMRHSR 104
C+ C+ C+ D A LC CD VH+A+ L RH R
Sbjct: 63 CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQR 102
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.134 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,848,730
Number of extensions: 120807
Number of successful extensions: 327
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 299
Number of HSP's successfully gapped: 22
Length of query: 269
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 172
Effective length of database: 8,447,217
Effective search space: 1452921324
Effective search space used: 1452921324
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 111 (47.4 bits)