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Os02g0643800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Auxin responsive SAUR protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.19 (0.0383) R2 : 0.489
β1 : 0.917 (0.14) R2dD : 0.0503 R2D : 0.00376
β2 : 1.23 (0.102) R2dC : 0.206 R2C : 0.31
β3 : 1.42 (0.172) R2dE : 0.0973 R2E : 0.18
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.577 (0.0827) R2dN8 : 0.0754 R2N8 : 0.0114
σ : 0.714
deviance : 235.26
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C
peak time of C : 12.5
E
wheather : humidity
threshold : 62.76
memory length : 1128
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
222.39 0.701 6.19 0.813 1.26 1.35 -1.82 1.68 0.553 12.3 62.83 1164 -- --
226.08 0.7 6.18 0.984 1.24 1.44 -1.46 -- 0.577 12.3 61.8 1146 -- --
234.79 0.714 6.19 0.73 1.63 1.25 -- 1.69 0.557 12.3 64 1477 -- --
235.26 0.714 6.19 0.917 1.23 1.42 -- -- 0.577 12.5 62.76 1128 -- --
296.97 0.803 6.18 0.841 -- 2.45 -- 0.0956 0.679 -- 67.72 1009 -- --
262.38 0.759 6.2 0.944 1.6 -- -1.33 -- 0.472 12.3 -- -- -- --
269.99 0.769 6.21 0.892 1.61 -- -- -- 0.466 12.4 -- -- -- --
296.97 0.803 6.18 0.854 -- 2.44 -- -- 0.679 -- 67.49 1009 -- --
254.35 0.743 6.19 -- 1.23 1.57 -- -- 0.531 12.5 78.1 1091 -- --
431.92 0.971 6.24 0.838 -- -- -- -- 0.44 -- -- -- -- --
290.98 0.798 6.23 -- 1.59 -- -- -- 0.366 12.3 -- -- -- --
313.44 0.825 6.19 -- -- 2.58 -- -- 0.63 -- 76.73 987 -- --
450.46 0.991 6.26 -- -- -- -- -- 0.347 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 216.29 humidity 90.0 720 < th dose dependent rect. 16 16
3 216.92 radiation 20.0 14400 < th dose independent rect. 15 1
4 217.00 temperature 25.0 14400 > th dose dependent rect. 20 5
5 217.06 temperature 25.0 14400 > th dose dependent rect. 22 2
8 217.17 radiation 20.0 14400 > th dose independent rect. 15 1
9 217.19 precipitation 0.1 43200 > th dose dependent rect. 16 1
12 217.26 precipitation 0.1 43200 > th dose independent rect. 16 1
15 217.36 radiation 20.0 14400 > th dose independent rect. 15 18
20 217.47 precipitation 0.1 43200 < th dose independent rect. 16 1
21 217.47 precipitation 0.1 43200 < th dose dependent rect. 16 1
23 217.57 wind 3.0 43200 < th dose dependent rect. 2 3
30 217.71 temperature 25.0 14400 > th dose dependent rect. 20 1
32 217.73 precipitation 0.1 43200 > th dose independent rect. 14 6
33 217.74 precipitation 0.1 43200 < th dose independent rect. 14 6
34 217.74 temperature 30.0 14400 < th dose independent rect. 17 17
35 217.74 precipitation 0.1 43200 < th dose dependent rect. 14 6
39 217.88 precipitation 0.1 43200 < th dose independent rect. 12 8
41 217.88 precipitation 0.1 43200 < th dose dependent rect. 12 8
42 217.89 precipitation 0.1 43200 > th dose independent rect. 12 8
54 218.05 temperature 30.0 43200 > th dose independent rect. 18 1
71 218.08 temperature 30.0 14400 > th dose dependent rect. 17 20
75 218.11 temperature 30.0 14400 > th dose dependent rect. 12 1
81 218.18 precipitation 0.1 43200 < th dose independent rect. 9 9
82 218.18 precipitation 0.1 43200 < th dose dependent rect. 9 9
83 218.19 precipitation 0.1 43200 > th dose independent rect. 9 9
88 218.22 temperature 30.0 14400 > th dose independent rect. 17 18
91 218.25 temperature 25.0 14400 > th dose dependent rect. 20 12
92 218.26 precipitation 0.1 43200 > th dose independent rect. 7 11
93 218.26 temperature 30.0 14400 > th dose independent rect. 17 20
95 218.27 precipitation 0.1 43200 < th dose independent rect. 7 11
98 218.27 precipitation 0.1 43200 < th dose dependent rect. 7 11
121 218.35 wind 1.0 43200 < th dose independent rect. 3 1
138 218.37 temperature 25.0 14400 > th dose dependent rect. 18 14
154 218.44 wind 1.0 43200 < th dose independent rect. 1 4
157 218.45 wind 1.0 43200 > th dose independent rect. 1 4
166 218.47 temperature 30.0 14400 > th dose dependent rect. 17 17
172 218.49 temperature 30.0 14400 < th dose independent rect. 17 15
175 218.50 temperature 30.0 14400 < th dose independent sin 10 NA
176 218.50 radiation 30.0 14400 > th dose independent rect. 14 20
179 218.51 temperature 30.0 14400 < th dose independent rect. 17 2
180 218.51 temperature 30.0 14400 < th dose independent rect. 17 4
196 218.53 radiation 30.0 14400 > th dose independent rect. 7 3
212 218.54 wind 1.0 43200 > th dose independent rect. 3 2
220 218.57 temperature 30.0 14400 < th dose independent rect. 9 4
244 218.66 radiation 20.0 14400 < th dose independent rect. 15 18
246 218.66 radiation 30.0 14400 > th dose dependent rect. 14 1
254 218.68 temperature 30.0 14400 > th dose independent sin 10 NA
275 218.70 radiation 20.0 14400 > th dose independent sin 13 NA
276 218.70 temperature 30.0 14400 > th dose independent rect. 9 4
281 218.72 temperature 30.0 14400 > th dose dependent sin 10 NA
282 218.72 temperature 30.0 43200 > th dose dependent rect. 18 1
298 218.73 temperature 30.0 14400 < th dose independent rect. 5 8
302 218.74 temperature 30.0 14400 < th dose independent rect. 20 17
304 218.74 temperature 30.0 14400 > th dose dependent rect. 11 8
385 218.79 radiation 20.0 14400 > th dose independent rect. 12 21
391 218.80 temperature 30.0 14400 > th dose dependent sin 1 NA
393 218.80 temperature 30.0 14400 > th dose dependent no NA NA
486 218.81 temperature 30.0 14400 > th dose dependent sin 23 NA
517 218.82 radiation 30.0 14400 < th dose independent rect. 9 1
526 218.83 wind 3.0 43200 > th dose dependent rect. 7 2
604 218.90 radiation 10.0 14400 < th dose independent rect. 8 1
674 218.95 precipitation 0.1 43200 > th dose dependent rect. 12 5
690 218.96 humidity 80.0 14400 < th dose independent rect. 19 3
726 219.00 radiation 20.0 14400 > th dose independent rect. 15 22
761 219.05 radiation 20.0 14400 < th dose dependent rect. 8 1
783 219.06 radiation 20.0 14400 > th dose dependent rect. 14 19
810 219.12 humidity 70.0 14400 > th dose independent rect. 19 1
826 219.15 temperature 30.0 14400 > th dose dependent rect. 14 1
828 219.16 precipitation 0.1 43200 > th dose independent sin 22 NA
833 219.16 humidity 80.0 14400 < th dose dependent rect. 19 1
835 219.17 precipitation 0.1 43200 < th dose independent sin 22 NA
842 219.17 precipitation 0.1 43200 < th dose dependent sin 22 NA
849 219.18 radiation 10.0 14400 > th dose dependent rect. 15 1
898 219.24 temperature 30.0 14400 < th dose independent rect. 9 23
904 219.25 temperature 30.0 14400 < th dose independent rect. 9 10
915 219.25 temperature 30.0 14400 < th dose independent rect. 9 21
919 219.26 temperature 30.0 14400 > th dose independent rect. 12 1
953 219.29 temperature 30.0 14400 < th dose independent rect. 6 13
987 219.30 temperature 30.0 14400 < th dose independent no NA NA