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Os02g0639000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : NLI interacting factor domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.6 (0.0199) R2 : 0.458
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.02 (0.0521) R2dC : 0.455 R2C : 0.449
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.098 (0.042) R2dN8 : 0.00838 R2N8 : 0.00227
σ : 0.376
deviance : 64.7
__
_____
C
peak time of C : 5.35
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
53.41 0.343 10.6 0.0821 0.998 -0.739 0.3 0.956 -0.0922 6.83 4.229 10 -- --
55.27 0.346 10.6 0.115 1 -0.817 0.621 -- -0.089 7.11 4.825 9 -- --
53.61 0.341 10.6 0.0848 0.998 -0.709 -- 1.03 -0.0938 6.72 4.48 9 -- --
56.02 0.349 10.6 0.124 0.99 -0.724 -- -- -0.0901 6.69 6.72 9 -- --
77.64 0.41 10.6 0.243 -- -1.12 -- 0.812 -0.0457 -- -6.824e-05 619 -- --
64.2 0.376 10.6 0.117 1.02 -- -0.255 -- -0.0863 5.28 -- -- -- --
64.34 0.376 10.6 0.118 1.02 -- -- -- -0.0849 5.35 -- -- -- --
77.65 0.41 10.6 0.197 -- -1.07 -- -- 0.0329 -- -1.054 636 -- --
56.43 0.35 10.6 -- 0.992 -0.723 -- -- -0.103 6.68 6.719 9 -- --
118.23 0.508 10.6 0.152 -- -- -- -- -0.0597 -- -- -- -- --
64.7 0.376 10.6 -- 1.02 -- -- -- -0.098 5.35 -- -- -- --
78.68 0.413 10.6 -- -- -1.06 -- -- 0.0106 -- -17.86 641 -- --
118.85 0.509 10.6 -- -- -- -- -- -0.0766 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 42.77 temperature 25.0 270 < th dose independent rect. 16 15
19 45.47 temperature 10.0 270 > th dose dependent rect. 17 9
26 46.34 temperature 25.0 270 < th dose independent rect. 21 10
31 46.64 temperature 30.0 90 < th dose dependent rect. 16 16
42 46.97 temperature 10.0 270 > th dose dependent rect. 7 18
44 47.00 temperature 10.0 90 > th dose dependent rect. 9 18
45 47.03 humidity 50.0 90 > th dose dependent rect. 4 13
52 47.19 humidity 50.0 10 > th dose dependent rect. 5 13
53 47.20 radiation 20.0 270 < th dose dependent rect. 2 7
54 47.21 temperature 25.0 270 < th dose independent sin 11 NA
56 47.31 wind 9.0 270 < th dose independent rect. 6 21
63 47.39 temperature 25.0 270 < th dose independent rect. 3 3
64 47.40 radiation 20.0 270 < th dose dependent rect. 2 11
69 47.48 precipitation 0.1 270 < th dose independent rect. 3 3
70 47.48 precipitation 0.1 270 < th dose dependent rect. 3 3
72 47.50 radiation 1.0 270 > th dose independent sin 2 NA
78 47.57 radiation 20.0 270 < th dose dependent rect. 3 3
85 47.63 wind 9.0 270 < th dose independent rect. 3 3
86 47.63 temperature 10.0 270 > th dose independent rect. 3 3
89 47.63 humidity 50.0 270 > th dose independent rect. 3 3
92 47.63 atmosphere 995.0 270 > th dose independent rect. 3 3
93 47.63 atmosphere 1015.0 270 < th dose independent rect. 3 3
94 47.63 radiation 20.0 270 < th dose independent rect. 3 3
97 47.63 temperature 10.0 270 > th dose independent rect. 6 21
107 47.71 radiation 1.0 10 > th dose dependent rect. 9 3
108 47.73 temperature 25.0 270 < th dose independent rect. 2 5
128 47.97 radiation 10.0 270 < th dose independent rect. 2 6
132 48.04 radiation 40.0 10 < th dose independent rect. 5 13
134 48.05 radiation 20.0 270 < th dose independent rect. 1 8
149 48.14 temperature 10.0 10 > th dose dependent rect. 9 18
151 48.15 humidity 50.0 270 > th dose dependent rect. 3 3
167 48.29 radiation 1.0 270 < th dose independent rect. 3 13
208 48.56 wind 9.0 270 < th dose independent rect. 7 19
209 48.56 precipitation 0.1 270 < th dose independent rect. 6 21
211 48.56 precipitation 0.1 270 < th dose dependent rect. 6 21
212 48.57 humidity 50.0 270 > th dose independent rect. 13 17
229 48.66 temperature 15.0 270 > th dose independent rect. 6 6
237 48.71 precipitation 0.1 270 < th dose independent rect. 2 5
238 48.71 precipitation 0.1 270 < th dose dependent rect. 2 5
243 48.74 humidity 70.0 270 > th dose independent rect. 2 5
246 48.75 temperature 10.0 10 > th dose dependent rect. 8 21
254 48.80 humidity 60.0 10 > th dose independent rect. 5 13
260 48.81 wind 9.0 270 < th dose dependent rect. 3 3
261 48.82 wind 9.0 270 < th dose independent rect. 2 5
262 48.82 temperature 10.0 270 > th dose independent rect. 2 5
265 48.82 humidity 50.0 270 > th dose independent rect. 2 5
267 48.82 atmosphere 995.0 270 > th dose independent rect. 2 5
268 48.82 atmosphere 1015.0 270 < th dose independent rect. 2 5
270 48.82 temperature 10.0 270 > th dose independent rect. 7 19
274 48.86 temperature 30.0 270 < th dose dependent rect. 3 3
276 48.87 radiation 20.0 270 < th dose dependent sin 6 NA
297 48.98 radiation 1.0 270 > th dose independent rect. 6 6
309 49.04 radiation 1.0 270 > th dose independent rect. 17 21
312 49.04 radiation 10.0 10 > th dose dependent rect. 16 20
339 49.12 radiation 20.0 90 < th dose independent rect. 4 5
374 49.18 wind 9.0 270 < th dose independent rect. 6 6
384 49.20 radiation 30.0 270 < th dose independent rect. 15 11
386 49.21 wind 9.0 270 < th dose independent rect. 15 11
393 49.24 precipitation 0.1 270 < th dose independent rect. 7 19
397 49.24 precipitation 0.1 270 < th dose dependent rect. 7 19
400 49.26 radiation 40.0 90 < th dose dependent rect. 4 13
402 49.27 wind 9.0 270 < th dose dependent rect. 7 5
417 49.33 humidity 50.0 270 > th dose dependent rect. 2 5
424 49.37 precipitation 0.1 270 < th dose independent rect. 6 6
425 49.37 precipitation 0.1 270 < th dose dependent rect. 6 6
440 49.39 radiation 40.0 90 < th dose dependent rect. 4 9
442 49.40 humidity 60.0 90 > th dose independent rect. 4 14
446 49.41 radiation 40.0 90 < th dose dependent rect. 4 7
462 49.45 atmosphere 995.0 270 > th dose independent rect. 6 6
463 49.45 atmosphere 1015.0 270 < th dose independent rect. 6 6
464 49.45 temperature 10.0 270 > th dose independent rect. 12 18
467 49.46 humidity 50.0 270 > th dose independent rect. 6 6
468 49.47 precipitation 0.1 270 < th dose independent rect. 16 10
469 49.47 temperature 10.0 270 > th dose independent rect. 15 11
470 49.47 temperature 10.0 270 > th dose independent rect. 2 13
471 49.47 atmosphere 1015.0 270 < th dose independent rect. 2 13
475 49.47 precipitation 0.1 270 < th dose dependent rect. 16 10
476 49.48 precipitation 0.1 270 < th dose independent rect. 2 13
477 49.48 precipitation 0.1 270 < th dose dependent rect. 2 13
480 49.49 radiation 40.0 10 < th dose dependent rect. 5 10
495 49.54 humidity 50.0 270 > th dose independent rect. 2 15
503 49.56 radiation 40.0 10 < th dose dependent rect. 5 4
511 49.58 wind 9.0 270 < th dose independent rect. 12 18
520 49.60 wind 7.0 10 < th dose independent rect. 9 20
527 49.61 temperature 30.0 90 < th dose dependent rect. 19 13
533 49.63 precipitation 0.1 270 < th dose independent rect. 12 18
536 49.63 precipitation 0.1 270 < th dose dependent rect. 12 18
539 49.64 atmosphere 1015.0 270 < th dose independent rect. 7 18
548 49.67 wind 9.0 90 < th dose dependent rect. 8 20
550 49.68 wind 1.0 270 > th dose independent rect. 12 18
563 49.73 humidity 50.0 90 > th dose dependent rect. 4 5
566 49.74 atmosphere 995.0 270 > th dose independent rect. 2 13
567 49.74 radiation 40.0 10 < th dose dependent rect. 5 12
582 49.78 radiation 1.0 10 < th dose dependent sin 11 NA
585 49.79 wind 9.0 10 < th dose independent rect. 9 5
590 49.80 temperature 30.0 270 < th dose dependent rect. 1 6
595 49.81 humidity 60.0 30 > th dose independent rect. 12 21
603 49.82 humidity 50.0 30 > th dose independent rect. 14 19
604 49.82 radiation 40.0 10 < th dose dependent rect. 5 7
607 49.83 radiation 1.0 10 > th dose independent rect. 9 5
653 49.88 radiation 40.0 90 < th dose dependent rect. 4 11
691 49.99 humidity 90.0 10 < th dose dependent rect. 9 5
692 49.99 humidity 50.0 10 > th dose dependent rect. 5 10
698 50.00 wind 9.0 270 < th dose independent rect. 2 13
717 50.04 radiation 40.0 10 < th dose independent rect. 14 19
721 50.04 humidity 60.0 90 > th dose dependent rect. 4 7
744 50.08 radiation 40.0 10 < th dose independent rect. 5 17
755 50.10 atmosphere 995.0 270 > th dose independent rect. 12 18
773 50.15 atmosphere 995.0 270 > th dose independent rect. 17 9
778 50.15 wind 9.0 10 < th dose independent rect. 14 19
797 50.22 humidity 70.0 10 > th dose independent rect. 5 4
811 50.23 radiation 1.0 270 > th dose dependent rect. 16 20
819 50.25 temperature 10.0 10 > th dose independent rect. 9 5
821 50.25 atmosphere 995.0 10 > th dose independent rect. 9 5
822 50.25 atmosphere 1015.0 10 < th dose independent rect. 9 5
823 50.25 precipitation 0.1 10 < th dose independent rect. 9 5
826 50.25 temperature 10.0 10 > th dose independent rect. 14 19
828 50.25 precipitation 0.1 10 < th dose dependent rect. 9 5
832 50.26 precipitation 0.1 10 < th dose independent rect. 14 19
838 50.26 precipitation 0.1 10 < th dose dependent rect. 14 19
846 50.28 humidity 90.0 270 < th dose independent rect. 8 2
852 50.28 humidity 50.0 90 > th dose dependent sin 4 NA
855 50.29 humidity 90.0 10 < th dose independent rect. 9 5
858 50.29 radiation 40.0 270 < th dose dependent rect. 15 15
868 50.30 temperature 20.0 270 > th dose independent rect. 17 9
929 50.36 wind 9.0 270 < th dose dependent rect. 2 5
966 50.39 temperature 15.0 270 > th dose independent rect. 8 2
967 50.39 radiation 1.0 270 > th dose independent rect. 8 2
991 50.43 wind 7.0 10 < th dose independent rect. 5 4
993 50.43 temperature 10.0 10 > th dose independent rect. 5 4
995 50.43 temperature 30.0 10 < th dose independent rect. 5 4
996 50.43 humidity 50.0 10 > th dose independent rect. 5 4
998 50.43 atmosphere 995.0 10 > th dose independent rect. 5 4
999 50.43 atmosphere 1015.0 10 < th dose independent rect. 5 4
1000 50.43 humidity 90.0 270 < th dose independent rect. 7 5