Os02g0637900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0637900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.23 | 0.271 | 9.67 | -0.765 | 0.7 | -0.233 | 0.176 | -2.37 | -0.119 | 9.28 | 19.93 | 4392 | -- | -- |
| 36.37 | 0.281 | 9.59 | -0.145 | 0.661 | -0.322 | 0.159 | -- | -0.0331 | 9.22 | 28.49 | 2406 | -- | -- |
| 33.3 | 0.269 | 9.66 | -0.749 | 0.692 | -0.227 | -- | -2.35 | -0.116 | 9.2 | 19.95 | 4028 | -- | -- |
| 36.4 | 0.281 | 9.59 | -0.127 | 0.666 | -0.333 | -- | -- | -0.0194 | 9.22 | 28.33 | 2391 | -- | -- |
| 58.78 | 0.357 | 9.65 | -0.644 | -- | -0.39 | -- | -2.12 | -0.0477 | -- | 19.73 | 2223 | -- | -- |
| 40.26 | 0.297 | 9.58 | -0.227 | 0.703 | -- | 0.17 | -- | 0.00752 | 9.38 | -- | -- | -- | -- |
| 40.37 | 0.298 | 9.58 | -0.22 | 0.703 | -- | -- | -- | 0.00769 | 9.38 | -- | -- | -- | -- |
| 53.68 | 0.341 | 9.55 | -0.0178 | -- | -0.701 | -- | -- | 0.204 | -- | 24.2 | 806 | -- | -- |
| 36.84 | 0.283 | 9.59 | -- | 0.665 | -0.356 | -- | -- | -0.00887 | 9.27 | 28.49 | 2390 | -- | -- |
| 69.24 | 0.389 | 9.6 | -0.224 | -- | -- | -- | -- | 0.0103 | -- | -- | -- | -- | -- |
| 41.65 | 0.302 | 9.58 | -- | 0.703 | -- | -- | -- | 0.0322 | 9.4 | -- | -- | -- | -- |
| 52.27 | 0.337 | 9.59 | -- | -- | -0.778 | -- | -- | 0.0959 | -- | 24.4 | 766 | -- | -- |
| 70.57 | 0.392 | 9.6 | -- | -- | -- | -- | -- | 0.0352 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.21 | temperature | 20 | 4320 | > th | dose dependent | sin | 5 | NA |
| 2 | 33.21 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 14 |
| 3 | 33.21 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 18 |
| 6 | 33.22 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 12 |
| 20 | 33.22 | temperature | 20 | 4320 | > th | dose dependent | rect. | 15 | 22 |
| 27 | 33.23 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 36 | 33.23 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 21 |
| 57 | 33.23 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 23 |
| 73 | 33.24 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 22 |
| 207 | 33.34 | temperature | 20 | 4320 | > th | dose dependent | sin | 17 | NA |
| 243 | 33.38 | temperature | 20 | 4320 | > th | dose dependent | rect. | 5 | 4 |
| 265 | 33.40 | temperature | 20 | 4320 | > th | dose dependent | rect. | 14 | 10 |
| 275 | 33.41 | temperature | 25 | 4320 | > th | dose independent | rect. | 14 | 20 |
| 276 | 33.41 | temperature | 25 | 4320 | > th | dose independent | rect. | 16 | 21 |
| 297 | 33.43 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 331 | 33.46 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 22 |
| 339 | 33.47 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 18 |
| 342 | 33.47 | temperature | 25 | 4320 | < th | dose independent | rect. | 14 | 20 |
| 383 | 33.50 | temperature | 25 | 4320 | > th | dose independent | rect. | 1 | 23 |
| 393 | 33.51 | temperature | 25 | 4320 | > th | dose independent | no | NA | NA |
| 404 | 33.51 | temperature | 25 | 4320 | > th | dose independent | rect. | 4 | 22 |
| 405 | 33.51 | temperature | 25 | 4320 | < th | dose independent | rect. | 3 | 22 |
| 455 | 33.54 | temperature | 25 | 4320 | < th | dose independent | no | NA | NA |
| 481 | 33.55 | temperature | 25 | 4320 | > th | dose independent | rect. | 22 | 23 |
| 488 | 33.56 | temperature | 25 | 4320 | > th | dose independent | sin | 15 | NA |
| 526 | 33.57 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 23 |
| 534 | 33.58 | temperature | 25 | 4320 | > th | dose independent | rect. | 15 | 8 |
| 560 | 33.59 | temperature | 25 | 4320 | > th | dose independent | sin | 6 | NA |
| 561 | 33.59 | temperature | 25 | 4320 | < th | dose independent | sin | 6 | NA |
| 599 | 33.60 | temperature | 25 | 4320 | > th | dose independent | rect. | 14 | 12 |
| 687 | 33.62 | temperature | 20 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 793 | 33.65 | temperature | 25 | 4320 | < th | dose independent | sin | 16 | NA |
| 795 | 33.65 | temperature | 25 | 4320 | < th | dose independent | rect. | 15 | 9 |
| 944 | 33.68 | temperature | 20 | 4320 | > th | dose dependent | rect. | 10 | 3 |