Os02g0637000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Barwin-related endoglucanase domain containing protein.
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Os02g0637000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Barwin-related endoglucanase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 210.78 | 0.682 | 8.15 | -0.888 | 1.82 | -1.07 | 1.24 | 0.0717 | 0.224 | 11.4 | 19.85 | 762 | -- | -- |
| 209.34 | 0.674 | 8.16 | -0.932 | 1.83 | -1.18 | 1.27 | -- | 0.209 | 11.4 | 19.6 | 733 | -- | -- |
| 215.05 | 0.683 | 8.16 | -0.962 | 1.82 | -1.12 | -- | 0.613 | 0.206 | 11.4 | 19.42 | 844 | -- | -- |
| 215.78 | 0.684 | 8.15 | -0.886 | 1.83 | -1.24 | -- | -- | 0.223 | 11.5 | 19.5 | 853 | -- | -- |
| 389.17 | 0.924 | 8.17 | -0.715 | -- | -0.961 | -- | -0.14 | 0.282 | -- | 19.5 | 1677 | -- | -- |
| 238.81 | 0.724 | 8.11 | -0.482 | 1.68 | -- | 1.3 | -- | 0.435 | 11.5 | -- | -- | -- | -- |
| 246.06 | 0.735 | 8.1 | -0.429 | 1.67 | -- | -- | -- | 0.44 | 11.5 | -- | -- | -- | -- |
| 387.24 | 0.921 | 8.18 | -0.725 | -- | -0.959 | -- | -- | 0.274 | -- | 19.68 | 1643 | -- | -- |
| 232.77 | 0.711 | 8.12 | -- | 1.79 | -0.768 | -- | -- | 0.364 | 11.4 | 20.2 | 769 | -- | -- |
| 421.42 | 0.959 | 8.14 | -0.474 | -- | -- | -- | -- | 0.422 | -- | -- | -- | -- | -- |
| 250.92 | 0.741 | 8.09 | -- | 1.68 | -- | -- | -- | 0.488 | 11.5 | -- | -- | -- | -- |
| 398.49 | 0.933 | 8.16 | -- | -- | -0.788 | -- | -- | 0.353 | -- | 20.2 | 769 | -- | -- |
| 427.35 | 0.965 | 8.13 | -- | -- | -- | -- | -- | 0.475 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 195.63 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 3 | 197.29 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 4 | 197.56 | temperature | 20.0 | 720 | < th | dose independent | rect. | 22 | 10 |
| 6 | 197.76 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 8 | 197.76 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 10 | 197.94 | temperature | 20.0 | 720 | > th | dose independent | rect. | 5 | 1 |
| 13 | 198.36 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 10 |
| 20 | 198.72 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 4 |
| 31 | 199.32 | temperature | 20.0 | 720 | > th | dose independent | rect. | 24 | 7 |
| 33 | 199.45 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 22 | 9 |
| 43 | 199.93 | temperature | 20.0 | 270 | > th | dose independent | rect. | 2 | 7 |
| 46 | 200.02 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 22 | 5 |
| 61 | 200.44 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 65 | 200.61 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 22 | 5 |
| 75 | 200.84 | temperature | 20.0 | 720 | < th | dose independent | rect. | 2 | 5 |
| 81 | 200.97 | temperature | 20.0 | 720 | < th | dose independent | sin | 9 | NA |
| 115 | 201.54 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 122 | 201.64 | temperature | 20.0 | 720 | > th | dose independent | sin | 9 | NA |
| 127 | 201.70 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 128 | 201.70 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 141 | 202.06 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 22 | 8 |
| 142 | 202.07 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 14 | 20 |
| 161 | 202.41 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 168 | 202.54 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 184 | 202.70 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 199 | 202.91 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 200 | 202.91 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 202 | 202.93 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 211 | 202.99 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 241 | 203.25 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 5 |
| 259 | 203.50 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 260 | 203.50 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 267 | 203.55 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 5 |
| 274 | 203.60 | atmosphere | 1015.0 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 279 | 203.62 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 285 | 203.68 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 287 | 203.69 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 297 | 203.76 | atmosphere | 1015.0 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 306 | 203.81 | atmosphere | 1015.0 | 43200 | > th | dose dependent | rect. | 15 | 9 |
| 336 | 204.02 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 384 | 204.31 | atmosphere | 1015.0 | 43200 | > th | dose dependent | sin | 17 | NA |
| 387 | 204.33 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 399 | 204.39 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 410 | 204.42 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 429 | 204.47 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 478 | 204.65 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 498 | 204.75 | wind | 1.0 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 510 | 204.81 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 15 | 7 |
| 525 | 204.85 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 19 | 18 |
| 528 | 204.87 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 2 | 8 |
| 534 | 204.88 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 22 | 3 |
| 539 | 204.88 | atmosphere | 1015.0 | 43200 | > th | dose dependent | rect. | 11 | 8 |
| 566 | 204.94 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 581 | 204.98 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 599 | 205.04 | temperature | 10.0 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 621 | 205.09 | temperature | 10.0 | 43200 | < th | dose independent | rect. | 24 | 6 |
| 626 | 205.09 | temperature | 10.0 | 43200 | < th | dose dependent | rect. | 24 | 7 |
| 631 | 205.10 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 634 | 205.10 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 2 | 17 |
| 682 | 205.13 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 3 | 5 |
| 689 | 205.13 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 691 | 205.13 | temperature | 10.0 | 43200 | < th | dose dependent | sin | 1 | NA |
| 697 | 205.14 | temperature | 10.0 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 707 | 205.14 | temperature | 10.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 723 | 205.15 | humidity | 90.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 744 | 205.17 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 758 | 205.18 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 765 | 205.19 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 15 | 9 |
| 770 | 205.19 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 21 | 11 |
| 984 | 205.44 | temperature | 10.0 | 43200 | < th | dose independent | sin | 3 | NA |
| 987 | 205.44 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 20 | 11 |