Os02g0635000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Nitrilase 1.
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Os02g0635000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Nitrilase 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.41 | 0.302 | 13 | -1.36 | 1.61 | 0.896 | -0.832 | -2.22 | -0.351 | 22.2 | 1003 | 74 | -- | -- |
| 41.79 | 0.303 | 13 | -1.28 | 1.61 | 0.539 | -0.813 | -- | -0.358 | 22.2 | 1003 | 74 | -- | -- |
| 44.14 | 0.309 | 13 | -1.33 | 1.62 | 0.891 | -- | -2.13 | -0.349 | 22.2 | 1003 | 72 | -- | -- |
| 44.41 | 0.312 | 13 | -1.25 | 1.61 | 0.542 | -- | -- | -0.358 | 22.2 | 1003 | 17 | -- | -- |
| 194.26 | 0.649 | 12.9 | -1.29 | -- | 0.893 | -- | -1.25 | -0.225 | -- | 1011 | 467 | -- | -- |
| 45.68 | 0.317 | 13 | -1.22 | 1.61 | -- | -0.806 | -- | -0.389 | 22.2 | -- | -- | -- | -- |
| 48.25 | 0.325 | 13 | -1.19 | 1.61 | -- | -- | -- | -0.388 | 22.2 | -- | -- | -- | -- |
| 195.16 | 0.651 | 12.9 | -1.23 | -- | 0.82 | -- | -- | -0.24 | -- | 1012 | 500 | -- | -- |
| 84.52 | 0.431 | 13 | -- | 1.61 | 0.293 | -- | -- | -0.236 | 22.2 | 1003 | 17 | -- | -- |
| 205.51 | 0.67 | 12.9 | -1.17 | -- | -- | -- | -- | -0.385 | -- | -- | -- | -- | -- |
| 85.67 | 0.433 | 13 | -- | 1.6 | -- | -- | -- | -0.255 | 22.2 | -- | -- | -- | -- |
| 234.66 | 0.713 | 12.9 | -- | -- | 0.662 | -- | -- | -0.133 | -- | 1012 | 456 | -- | -- |
| 241.51 | 0.725 | 12.9 | -- | -- | -- | -- | -- | -0.255 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.74 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 12 | 40.20 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 30 | 40.44 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 9 | 12 |
| 31 | 40.47 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 10 | 3 |
| 38 | 40.54 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 20 | 11 |
| 40 | 40.55 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 20 | 10 |
| 56 | 40.69 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 62 | 40.71 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 82 | 40.78 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 9 | 4 |
| 85 | 40.79 | wind | 1.0 | 14400 | < th | dose independent | rect. | 9 | 4 |
| 88 | 40.80 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 4 | 19 |
| 131 | 40.93 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 18 |
| 133 | 40.93 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 18 |
| 134 | 40.94 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 138 | 40.97 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 3 | 23 |
| 144 | 41.00 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 148 | 41.02 | wind | 1.0 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 161 | 41.06 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 16 | 23 |
| 167 | 41.09 | wind | 1.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 172 | 41.10 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 11 | 12 |
| 186 | 41.14 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 10 |
| 187 | 41.14 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 1 | 22 |
| 190 | 41.14 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 10 |
| 192 | 41.15 | wind | 9.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 195 | 41.16 | wind | 9.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 199 | 41.18 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 18 |
| 201 | 41.19 | humidity | 80.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 205 | 41.20 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 206 | 41.20 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 207 | 41.20 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 4 | 19 |
| 209 | 41.21 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 9 | 13 |
| 212 | 41.22 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 233 | 41.27 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 13 | 14 |
| 236 | 41.27 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 13 | 14 |
| 241 | 41.29 | wind | 7.0 | 720 | < th | dose independent | rect. | 21 | 6 |
| 244 | 41.30 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 10 | 13 |
| 257 | 41.36 | humidity | 80.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 259 | 41.36 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 275 | 41.38 | radiation | 40.0 | 720 | < th | dose independent | rect. | 15 | 18 |
| 310 | 41.45 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 314 | 41.46 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 322 | 41.46 | atmosphere | 995.0 | 10 | > th | dose dependent | sin | 20 | NA |
| 330 | 41.47 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 17 | 13 |
| 334 | 41.47 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 18 |
| 341 | 41.49 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 21 | 6 |
| 345 | 41.49 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 21 | 6 |
| 354 | 41.50 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 357 | 41.50 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 7 | 21 |
| 372 | 41.53 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 3 | 2 |
| 379 | 41.54 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 386 | 41.54 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 10 | 13 |
| 410 | 41.57 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 3 | 3 |
| 416 | 41.57 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 428 | 41.58 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 437 | 41.59 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 9 | 6 |
| 439 | 41.59 | wind | 5.0 | 720 | < th | dose independent | rect. | 22 | 11 |
| 440 | 41.59 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 20 | 11 |
| 443 | 41.59 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 12 |
| 444 | 41.59 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 3 | 12 |
| 454 | 41.60 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 460 | 41.60 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 1 | 13 |
| 477 | 41.62 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 7 | 18 |
| 486 | 41.62 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 7 | 18 |
| 496 | 41.63 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 3 | 10 |
| 507 | 41.64 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 9 | 5 |
| 517 | 41.65 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 20 | 18 |
| 526 | 41.66 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 546 | 41.69 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 11 | 23 |
| 565 | 41.71 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 12 | 18 |
| 567 | 41.71 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 9 | 19 |
| 574 | 41.72 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 18 | 19 |
| 575 | 41.72 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 15 | 23 |
| 583 | 41.72 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 6 | 23 |
| 597 | 41.74 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 9 | 23 |
| 598 | 41.74 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 599 | 41.74 | atmosphere | 1015.0 | 10 | < th | dose dependent | sin | 19 | NA |
| 603 | 41.75 | atmosphere | 1000.0 | 90 | > th | dose independent | sin | 17 | NA |
| 607 | 41.75 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 611 | 41.75 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 22 | 3 |
| 637 | 41.77 | wind | 9.0 | 720 | < th | dose independent | rect. | 15 | 18 |
| 641 | 41.77 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 20 |
| 643 | 41.77 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 22 |
| 649 | 41.78 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 13 | 4 |
| 650 | 41.78 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 11 | 5 |
| 659 | 41.79 | atmosphere | 1000.0 | 10 | > th | dose independent | sin | 17 | NA |
| 684 | 41.81 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 13 | 20 |
| 690 | 41.81 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 20 | 20 |
| 692 | 41.81 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 13 | 20 |
| 727 | 41.84 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 11 | 10 |
| 744 | 41.85 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 18 | 4 |
| 759 | 41.85 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 24 | 5 |
| 768 | 41.86 | temperature | 25.0 | 720 | < th | dose independent | rect. | 19 | 11 |
| 770 | 41.86 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 9 | 15 |
| 772 | 41.86 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 13 | 4 |
| 775 | 41.86 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 9 | 15 |
| 787 | 41.87 | temperature | 25.0 | 720 | < th | dose independent | rect. | 21 | 9 |
| 790 | 41.87 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 791 | 41.87 | radiation | 30.0 | 4320 | < th | dose dependent | rect. | 13 | 1 |
| 800 | 41.88 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 804 | 41.88 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 1 | 23 |
| 812 | 41.89 | wind | 5.0 | 720 | < th | dose independent | rect. | 22 | 3 |
| 845 | 41.91 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 864 | 41.92 | radiation | 30.0 | 4320 | < th | dose dependent | rect. | 11 | 6 |
| 885 | 41.93 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 15 | 8 |
| 889 | 41.93 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 13 | 10 |
| 910 | 41.94 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 11 | 5 |
| 912 | 41.94 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 15 | 5 |
| 930 | 41.94 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 13 | 17 |
| 939 | 41.94 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 6 | 11 |
| 952 | 41.95 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 10 |
| 958 | 41.95 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 15 | 15 |
| 967 | 41.95 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 23 | 5 |
| 993 | 41.96 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 14 | 16 |
| 994 | 41.96 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 18 | 17 |
| 995 | 41.96 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 20 |